RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 GHDCQ8N2G8 530 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF441Q8N8Z8 693 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 ZFP62Q8NB50 900 aaPredicted RBP13.29□□□□□ -0.28
TUBE1-208ENST00000604743 OR10G3Q8NGC4 313 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 OR52N2Q8NGI0 321 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 OR9A2Q8NGT5 310 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 GFM2Q969S9 779 aaKnown RBP13.29□□□□□ -0.28
TUBE1-208ENST00000604743 ADIPOR1Q96A54 375 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 TP53INP1Q96A56 240 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 EGLN2Q96KS0 407 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 PSMG3-AS1Q96PY0 264 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 FAM173AQ9BQD7 235 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 ITPAQ9BY32 194 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 MYNNQ9NPC7 610 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 NPFFR2Q9Y5X5 522 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 A0A1B0GUH1 482 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 ACOT7O00154 380 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CCL21O00585 134 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 PIP5K1BO14986 540 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 SLC19A2O60779 497 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 NME6O75414 186 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 SKAP2O75563 359 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 LYPLA1O75608 230 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CBX7O95931 251 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 JUNP05412 331 aaKnown RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 FGF4P08620 206 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 FBXO45P0C2W1 286 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 NEFHP12036 1026 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 ABOP16442 354 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 TACR1P25103 407 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 ARRB2P32121 409 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 SOX18P35713 384 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CASP6P55212 293 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 PER3P56645 1201 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 NRG3P56975 720 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 FBXW4P57775 412 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 DUSP8Q13202 625 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 KIAA0040Q15053 153 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CHI3L2Q15782 390 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 C3AR1Q16581 482 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 GK5Q6ZS86 529 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 SPPL2CQ8IUH8 684 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 FAM9CQ8IZT9 166 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CLHC1Q8NHS4 586 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 FAM76AQ8TAV0 307 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 JSRP1Q96MG2 331 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 PAIP2Q9BPZ3 127 aaKnown RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 TTTY12Q9BZ98 90 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 NXF5Q9H1B4 397 aaKnown RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 TUBA8Q9NY65 449 aaPredicted RBP13.28□□□□□ -0.28
TUBE1-208ENST00000604743 GIMAP2Q9UG22 337 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF639Q9UID6 485 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 ZDHHC2Q9UIJ5 367 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 CFL2Q9Y281 166 aa13.28□□□□□ -0.28
TUBE1-208ENST00000604743 A0A1B0GTH9 108 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 CAPN14A8MX76 684 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 AKAP10O43572 662 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 ITM2AO43736 263 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 ZG16O60844 167 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 HSPA4LO95757 839 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 PRPH2P23942 346 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 MPIP34949 423 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 SERPINB5P36952 375 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 NCBP2P52298 156 aaKnown RBP eCLIP13.27□□□□□ -0.29
TUBE1-208ENST00000604743 KCNJ2P63252 427 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 UGT3A2Q3SY77 523 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 RFTN2Q52LD8 501 aaPredicted RBP13.27□□□□□ -0.29
TUBE1-208ENST00000604743 CMPK2Q5EBM0 449 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 HIST2H2BCQ6DN03 193 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 ANKRD26P1Q6NSI1 321 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 SLC22A16Q86VW1 577 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 ANKRD42Q8N9B4 389 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.27□□□□□ -0.29
TUBE1-208ENST00000604743 PAQR8Q8TEZ7 354 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 DIO2Q92813 273 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 CTHRC1Q96CG8 243 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 TSSK3Q96PN8 268 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 SSU72Q9NP77 194 aaKnown RBP13.27□□□□□ -0.29
TUBE1-208ENST00000604743 EHD3Q9NZN3 535 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 PRODH2Q9UF12 536 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 BAIAP2L1Q9UHR4 511 aa13.27□□□□□ -0.29
TUBE1-208ENST00000604743 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.27□□□□□ -0.29
TUBE1-208ENST00000604743 ATP6AP2A0A1C7CYW4 349 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 MYO1GB0I1T2 1018 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 TP53I11O14683 189 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 LSM1O15116 133 aaKnown RBP13.26□□□□□ -0.29
TUBE1-208ENST00000604743 TM9SF1O15321 606 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 PEX11AO75192 247 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 ATP6AP2O75787 350 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 ESRRAP11474 423 aaPredicted RBP13.26□□□□□ -0.29
TUBE1-208ENST00000604743 SDC1P18827 310 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 NTSP30990 170 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 CA7P43166 264 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 MAGEA5P43359 124 aa13.26□□□□□ -0.29
TUBE1-208ENST00000604743 EMDP50402 254 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms