RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 QSOX2Q6ZRP7 698 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 ZNF767PQ75MW2 155 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 SPNS2Q8IVW8 549 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 ZCCHC9Q8N567 271 aaKnown RBP6.79□□□□□ -1.32
TUBE1-207ENST00000604689 CCDC54Q8NEL0 328 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 PHOSPHO1Q8TCT1 267 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 SPPL2AQ8TCT8 520 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 DEDD2Q8WXF8 326 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 TMEM45BQ96B21 275 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 MED8Q96G25 268 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 KREMEN1Q96MU8 473 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 EBNA1BP2Q99848 306 aaKnown RBP6.79□□□□□ -1.32
TUBE1-207ENST00000604689 PIGQQ9BRB3 760 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 ELOVL4Q9GZR5 314 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 RNF208Q9H0X6 261 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 SLC32A1Q9H598 525 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 CLDND1Q9NY35 253 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 RNF11Q9Y3C5 154 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 AP4S1Q9Y587 144 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 ACTL7BQ9Y614 415 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 DOT1LQ8TEK3 1739 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 TAF1P21675 1872 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 COL4A1P02462 1669 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 ANKRD12Q6UB98 2062 aa6.79□□□□□ -1.32
TUBE1-207ENST00000604689 B4GALT2O60909 372 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 FAM58BPP0C7Q3 252 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 PVALBP20472 110 aaPredicted RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 DRD1P21728 446 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CD72P21854 359 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 PTPN3P26045 913 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 PRDX6P30041 224 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 VIPR2P41587 438 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 KCNJ3P48549 501 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 VEGFCP49767 419 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 IRF8Q02556 426 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 OXA1LQ15070 435 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 ARHGAP11BQ3KRB8 267 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 ZNF789Q5FWF6 425 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 SPANXN2Q5MJ10 180 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 C1orf186Q6ZWK4 172 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TFAP2DQ7Z6R9 452 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 ZNF280BQ86YH2 543 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 ZDHHC13Q8IUH4 622 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 UBE2J2Q8N2K1 259 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CYB561A3Q8NBI2 242 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TRUB1Q8WWH5 349 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 C12orf43Q96C57 262 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 PDLIM5Q96HC4 596 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 RPL10LQ96L21 214 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 LINC00615Q96LM1 132 aaPredicted RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 UBTD1Q9HAC8 227 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 FBXO8Q9NRD0 319 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 YAE1D1Q9NRH1 226 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 PTGFRNQ9P2B2 879 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 DHCR7Q9UBM7 475 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TIAM2Q8IVF5 1701 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 C7orf72A4D263 438 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CXorf49A8MYA2 514 aaPredicted RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 F5H6K3 240 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 RAD1O60671 282 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 NPSP0C0P6 89 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TPH1P17752 444 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 GLDCP23378 1020 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 GLRA1P23415 457 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 KLRC2P26717 231 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 GABRB3P28472 473 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 HPCAL1P37235 193 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CTSKP43235 329 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 RGS6P49758 472 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 RAB31Q13636 194 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 HLXQ14774 488 aaPredicted RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 EXT1Q16394 746 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CCNJQ5T5M9 372 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 RAET1LQ5VY80 246 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 BICRALQ6AI39 1079 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TMIGD1Q6UXZ0 262 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CYHR1Q6ZMK1 362 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CHST9Q7L1S5 443 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 RNASE8Q8TDE3 154 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TM9SF4Q92544 642 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 FCRL3Q96P31 734 aaPredicted RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 CBWD1Q9BRT8 395 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 GPR87Q9BY21 358 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 SMG9Q9H0W8 520 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 ANKRD19PQ9H560 264 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 GEMIN7Q9H840 131 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 FKRPQ9H9S5 495 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 MRTO4Q9UKD2 239 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 TCFL5Q9UL49 500 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 YARS2Q9Y2Z4 477 aaKnown RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 NUBP2Q9Y5Y2 271 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 LOC285556D6RIA3 1793 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 ADAMTSL1Q8N6G6 1762 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 UBA6A0AVT1 1052 aaPredicted RBP6.78□□□□□ -1.32
TUBE1-207ENST00000604689 MAN2B1O00754 1011 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 SIAH2O43255 324 aa6.78□□□□□ -1.32
TUBE1-207ENST00000604689 SLC43A1O75387 559 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms