RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 RXFP3Q9NSD7 469 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 ACER3Q9NUN7 267 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 TDP1Q9NUW8 608 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 CNOT2Q9NZN8 540 aaKnown RBP7.55□□□□□ -1.2
HCG18-248ENST00000602861 STOX2Q9P2F5 926 aaPredicted RBP7.55□□□□□ -1.2
HCG18-248ENST00000602861 B4GALT6Q9UBX8 382 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 ZNF282Q9UDV7 671 aaPredicted RBP7.55□□□□□ -1.2
HCG18-248ENST00000602861 CGGBP1Q9UFW8 167 aaPredicted RBP7.55□□□□□ -1.2
HCG18-248ENST00000602861 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.55□□□□□ -1.2
HCG18-248ENST00000602861 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 CAB39Q9Y376 341 aaPredicted RBP7.55□□□□□ -1.2
HCG18-248ENST00000602861 TSC22D4Q9Y3Q8 395 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 PCDHGB6Q9Y5F9 930 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 PCDHGA5Q9Y5G8 931 aa7.55□□□□□ -1.2
HCG18-248ENST00000602861 DSPPQ9NZW4 1301 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CNOT1A5YKK6 2376 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 LOC100506127A0A0U1RQW1 187 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SH3D21A4FU49 640 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ARRDC5A6NEK1 342 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 EFCAB10A6NFE3 127 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ZAR1LA6NP61 321 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 M0R129 80 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 PCDH17O14917 1159 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 NPC1O15118 1278 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 KPNA5O15131 536 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ASNA1O43681 348 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SSX4O60224 188 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 KIAA0513O60268 411 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 GPX5O75715 221 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SLCO2B1O94956 709 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 AP2A2O94973 939 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 APBB3O95704 486 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ZNF806P0C7X5 589 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ETFAP13804 333 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ALOX12P18054 663 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ENDOUP21128 410 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 DRD1P21728 446 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 AQP1P29972 269 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 NR4A2P43354 598 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CDH12P55289 794 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 PCBP3P57721 371 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 SNRPD1P62314 119 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 LRRC74AQ0VAA2 488 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ST3GAL4Q11206 333 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 DDX39BQ13838 428 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 PDE7AQ13946 482 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SCARB2Q14108 478 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SSX1Q16384 188 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CARTPTQ16568 116 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 TSTQ16762 297 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 PLK5Q496M5 336 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CCSMST1Q4G0I0 132 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CRB2Q5IJ48 1285 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 AGAP6Q5VW22 663 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SLX4IPQ5VYV7 408 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ZDHHC20Q5W0Z9 365 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 TCEAL6Q6IPX3 200 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 AGTRAPQ6RW13 159 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 USP45Q70EL2 814 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 HTR3DQ70Z44 454 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 HEATR4Q86WZ0 1026 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 RNF130Q86XS8 419 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SYTL1Q8IYJ3 562 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 STX19Q8N4C7 294 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CAMKK1Q8N5S9 505 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 PAF1Q8N7H5 531 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 Q8N9G6 341 aaPredicted RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 B3GNT7Q8NFL0 401 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 OR9Q2Q8NGE9 314 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 OR56A3Q8NH54 315 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 RPLP0P6Q8NHW5 317 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 NFKBIDQ8NI38 313 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SPPL2AQ8TCT8 520 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 ELMO1Q92556 727 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 TCEAL3Q969E4 200 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CXorf40BQ96DE9 158 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CHFRQ96EP1 664 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 AGAP4Q96P64 663 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 OPALINQ96PE5 141 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 OR5M11Q96RB7 305 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 CHCHD6Q9BRQ6 235 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 DUSP23Q9BVJ7 150 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 TMEM38AQ9H6F2 299 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SGK2Q9HBY8 427 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 SLC25A19Q9HC21 320 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 FZD3Q9NPG1 666 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 MS4A12Q9NXJ0 267 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 TAS2R16Q9NYV7 291 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 PRR13Q9NZ81 148 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 NPAP1Q9NZP6 1156 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 LSM2Q9Y333 95 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 RBMX2Q9Y388 322 aaKnown RBP7.54□□□□□ -1.2
HCG18-248ENST00000602861 WNT6Q9Y6F9 365 aa7.54□□□□□ -1.2
HCG18-248ENST00000602861 NINQ8N4C6 2090 aa7.53□□□□□ -1.2
HCG18-248ENST00000602861 TRAV19A0A0A6YYK7 116 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms