RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MAPKAP1Q9BPZ7 522 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 KCNS3Q9BQ31 491 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 SPATA9Q9BWV2 254 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TMEM38AQ9H6F2 299 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 PELI2Q9HAT8 420 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 SIRT3Q9NTG7 399 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 GIMAP4Q9NUV9 329 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 ARHGEF17Q96PE2 2063 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 ARID1BQ8NFD5 2236 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CLCA1A8K7I4 914 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 H3BQ06 376 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TLR4O00206 839 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TAF4O00268 1085 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TYRP1P17643 537 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 HIST1H1TP22492 207 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CMPK1P30085 196 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CRISP1P54107 249 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 KCNJ8Q15842 424 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CCNJQ5T5M9 372 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 IKBIPQ70UQ0 350 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 COMTD1Q86VU5 262 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 AMIGO1Q86WK6 493 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TP53I13Q8NBR0 393 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR6T1Q8NGN1 323 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 SLC7A13Q8TCU3 470 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TEX101Q9BY14 249 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 UCK2Q9BZX2 261 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 AICDAQ9GZX7 198 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 GPN2Q9H9Y4 310 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CNIH4Q9P003 139 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 LRRC72A6NJI9 287 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 K7EQS6 105 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 WWP2O00308 870 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF888P0CJ79 500 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 SOX3P41225 446 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TAS2R41P59536 307 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 DEFB110Q30KQ9 67 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 C10orf62Q5T681 223 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 FRMPD2BQ6IN97 320 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 PRR23CQ6ZRP0 262 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 VRK2Q86Y07 508 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 GOT1L1Q8NHS2 421 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 MTERF3Q96E29 417 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CNRIP1Q96F85 164 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 PRRG3Q9BZD7 231 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 BTBD1Q9H0C5 482 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF780BQ9Y6R6 833 aa10.89□□□□□ -0.67
ARHGEF1-220ENST00000600274 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZNF106Q9H2Y7 1883 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 CABIN1Q9Y6J0 2220 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 NPIPA5A0A0B4J1W7 369 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 PRSS38A1L453 326 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 PRAMEF27A3QJZ7 478 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 NPIPA7E9PJI5 369 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 NPIPA8P0DM63 369 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 SF3B4Q15427 424 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■■■■ 35.4
ARHGEF1-220ENST00000600274 CRB2Q5IJ48 1285 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 PAQR6Q6TCH4 344 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 TBC1D19Q8N5T2 526 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 RHOXF1Q8NHV9 184 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR2M4Q96R27 311 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 C1QTNF7Q9BXJ2 289 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 MSRAQ9UJ68 235 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 TDRD6O60522 2096 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 SLC22A1O15245 554 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 DNAJB6O75190 326 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 SEMA7AO75326 666 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 HOXB6P17509 224 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 DDX5P17844 614 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 C21orf58P58505 322 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 CHRNEQ04844 493 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 EEF1A2Q05639 463 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 HYAL1Q12794 435 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 ARHGAP19Q14CB8 494 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 GPR68Q15743 365 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 TAB1Q15750 504 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 SAXO2Q658L1 398 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 ZC3H14Q6PJT7 736 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 SPATC1Q76KD6 591 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 IL17RCQ8NAC3 791 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 CHPT1Q8WUD6 406 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 RSPO3Q9BXY4 272 aaPredicted RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 C14orf119Q9NWQ9 140 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 APOBEC3BQ9UH17 382 aaKnown RBP10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 PSORS1C1Q9UIG5 152 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 NCKAP1Q9Y2A7 1128 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 SLC9A8Q9Y2E8 581 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 PLXNA2O75051 1894 aa10.88□□□□□ -0.67
ARHGEF1-220ENST00000600274 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 LDB3O75112 727 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 APOA1P02647 267 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ADORA3P0DMS8 318 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 PCSK2P16519 638 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 CPN2P22792 545 aa10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 ATP5A1P25705 553 aaKnown RBP10.87□□□□□ -0.67
ARHGEF1-220ENST00000600274 GRK5P34947 590 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms