RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ZNF468Q5VIY5 522 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 SPATA19Q7Z5L4 167 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 CYP4Z2PQ8N1L4 340 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 KRTCAP2Q8N6L1 136 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 OR52R1Q8NGF1 315 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 C16orf52Q8NHV5 167 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 ERP27Q96DN0 273 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 ZBED6CLQ96FA7 236 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 C5orf34Q96MH7 638 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 SIGLEC12Q96PQ1 595 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 DPY30Q9C005 99 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 EPN3Q9H201 632 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 ATAD3AQ9NVI7 634 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 HPF1Q9NWY4 346 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 PRODH2Q9UF12 536 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 ERVK-11Q9UQG0 969 aa18.21■□□□□ 0.51
SHKBP1-214ENST00000597396 DYNC1I1O14576 645 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 SOX3P41225 446 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 MANFP55145 182 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 HSPB3Q12988 150 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 PIGGQ5H8A4 983 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF766Q5HY98 468 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 SPINK14Q6IE38 97 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 OPN5Q6U736 354 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 RGS9BPQ6ZS82 235 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF551Q7Z340 670 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 MAVSQ7Z434 540 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 MDS2Q8NDY4 140 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 TMEM125Q96AQ2 219 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 MAELQ96JY0 434 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 ANKRA2Q9H9E1 313 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 MAP10Q9P2G4 905 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 PCDHGA10Q9Y5H3 936 aa18.2■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF195O14628 629 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 PLOD3O60568 738 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 ALDOCP09972 364 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 LAMP1P11279 417 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 GPX3P22352 226 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 SOX18P35713 384 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 MC3RP41968 323 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 NR0B1P51843 470 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 MLLT10P55197 1068 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 TMEM107Q6UX40 140 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 IL20RBQ6UXL0 311 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 ACAD11Q709F0 780 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 RIMKLAQ8IXN7 391 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 GPALPP1Q8IXQ4 340 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 NATD1Q8N6N6 113 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 TMEM178AQ8NBL3 297 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 SIMC1Q8NDZ2 872 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 OR7G2Q8NG99 324 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 CEP70Q8NHQ1 597 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 ACTRT2Q8TDY3 377 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 MAGED4Q96JG8 741 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 TRIM45Q9H8W5 580 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 KLHL1Q9NR64 748 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 ACSS1Q9NUB1 689 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 DDX18Q9NVP1 670 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 AIG1Q9NVV5 245 aa18.19■□□□□ 0.5
SHKBP1-214ENST00000597396 A0A087WV62 115 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 TCP11X1B4DZS4 312 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 COQ9O75208 318 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 SLC25A12O75746 678 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 NEURL1O76050 574 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 OR6B1O95007 311 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 TGDSO95455 350 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 EFNA1P20827 205 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 FRKP42685 505 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 C21orf58P58505 322 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 DUSP8Q13202 625 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 RPS6KA2Q15349 733 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 PGS1Q32NB8 556 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 SLC25A25Q6KCM7 469 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 EPGNQ6UW88 154 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 SLC15A4Q8N697 577 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 TP53INP1Q96A56 240 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 OR52B2Q96RD2 323 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 DUSP26Q9BV47 211 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 ITPAQ9BY32 194 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 TAS2R9Q9NYW1 312 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 DTX4Q9Y2E6 619 aa18.18■□□□□ 0.5
SHKBP1-214ENST00000597396 SHANK1Q9Y566 2161 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 A0A1W2PRB8 838 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 PLOD2O00469 737 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF354AO60765 605 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 NADKO95544 446 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 SP1P08047 785 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 EMDP50402 254 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 CLNS1AP54105 237 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 NME5P56597 212 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 NRG3P56975 720 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 TLE1Q04724 770 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 INPP5JQ15735 1006 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 MAPKAPK3Q16644 382 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 FHL5Q5TD97 284 aa18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 RPUSD3Q6P087 351 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 CISD2Q8N5K1 135 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-214ENST00000597396 ZNF441Q8N8Z8 693 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms