RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 NINQ8N4C6 2090 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 C2orf92A0A1B0GVN3 265 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 A8MVJ9 347 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 TCP11X1B4DZS4 312 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 SDHDO14521 159 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 SCAMP2O15127 329 aaKnown RBP13.84□□□□□ -0.19
SCN1B-204ENST00000596348 KITP10721 976 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 G6PDP11413 515 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 NTSP30990 170 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 MPIP34949 423 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 EMDP50402 254 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 NR0B1P51843 470 aaKnown RBP13.84□□□□□ -0.19
SCN1B-204ENST00000596348 NCBP2P52298 156 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCN1B-204ENST00000596348 DIO3P55073 304 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 PPP2R2AP63151 447 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 EMX2Q04743 252 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ZNF791Q3KP31 576 aaPredicted RBP13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ZNF324BQ6AW86 544 aaPredicted RBP13.84□□□□□ -0.19
SCN1B-204ENST00000596348 TMEM64Q6YI46 380 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 MAVSQ7Z434 540 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 GPALPP1Q8IXQ4 340 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 KRTCAP2Q8N6L1 136 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 TMEM178AQ8NBL3 297 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 OR7A2PQ8NGA2 310 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 FAR1Q8WVX9 515 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 PPCDCQ96CD2 204 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ITPAQ9BY32 194 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 NXF5Q9H1B4 397 aaKnown RBP13.84□□□□□ -0.19
SCN1B-204ENST00000596348 HPF1Q9NWY4 346 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ASIC5Q9NY37 505 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 BCAP29Q9UHQ4 241 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ATP6V1HQ9UI12 483 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ERVK-11Q9UQG0 969 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 ZNF407Q9C0G0 2248 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 PTPN13Q12923 2485 aa13.84□□□□□ -0.19
SCN1B-204ENST00000596348 A0A0G2JMM0 328 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 A0A1W2PPB8 328 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 A0A1W2PRS3 328 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 ASPDHA6ND91 283 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 KIR3DP1A8MWS1 328 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 HDAC3O15379 428 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 PDPK1O15530 556 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 PLOD3O60568 738 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 WISP2O76076 250 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 RASAL1O95294 804 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 WISP1O95388 367 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 PRPS2P11908 318 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 EFNA1P20827 205 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 MC3RP41968 323 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 FRKP42685 505 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 UQCRFS1P47985 274 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 NNATQ16517 81 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 SMU1Q2TAY7 513 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 OPN5Q6U736 354 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 FAM180AQ6UWF9 173 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 TMEM107Q6UX40 140 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 LARP4Q71RC2 724 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 ZNF551Q7Z340 670 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 WDR75Q8IWA0 830 aaKnown RBP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 RIMKLAQ8IXN7 391 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 SLC15A4Q8N697 577 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 BCORP1Q8N888 145 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 GALNT11Q8NCW6 608 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 PSD4Q8NDX1 1056 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 SLC22A8Q8TCC7 542 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 TP53INP1Q96A56 240 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 TMEM125Q96AQ2 219 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 ERP27Q96DN0 273 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 FRMD6Q96NE9 622 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 SLX1AQ9BQ83 275 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 SLCO1B3Q9NPD5 702 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 DEPPQ9NTK1 212 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 NOP53Q9NZM5 478 aaKnown RBP13.83□□□□□ -0.2
SCN1B-204ENST00000596348 SH3BP4Q9P0V3 963 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 DNAJC13O75165 2243 aa13.83□□□□□ -0.2
SCN1B-204ENST00000596348 FBXO45P0C2W1 286 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 LAMP1P11279 417 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 MST1P26927 711 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 HPCAL1P37235 193 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 GPR85P60893 370 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 HSPB3Q12988 150 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 MAD2L1Q13257 205 aaPredicted RBP13.82□□□□□ -0.2
SCN1B-204ENST00000596348 MRPL49Q13405 166 aaKnown RBP13.82□□□□□ -0.2
SCN1B-204ENST00000596348 RNFT1Q5M7Z0 435 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 HLA-DQA1Q5Y7H0 255 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 RTL4Q6ZR62 310 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 CPSF7Q8N684 471 aaKnown RBP13.82□□□□□ -0.2
SCN1B-204ENST00000596348 C17orf47Q8NEP4 570 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 NR4A3Q92570 626 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 MTERF3Q96E29 417 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 SPACA9Q96E40 222 aaPredicted RBP13.82□□□□□ -0.2
SCN1B-204ENST00000596348 VSTM2LQ96N03 204 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 WDR55Q9H6Y2 383 aaPredicted RBP13.82□□□□□ -0.2
SCN1B-204ENST00000596348 SH2D2AQ9NP31 389 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 TIMMDC1Q9NPL8 285 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 AGPAT4Q9NRZ5 378 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 OLAHQ9NV23 265 aa13.82□□□□□ -0.2
SCN1B-204ENST00000596348 EIF3LQ9Y262 564 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms