RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CCDC154A6NI56 674 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 NR5A2O00482 541 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 CFLARO15519 480 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 PSMG1O95456 288 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 ABCB1P08183 1280 aaPredicted RBP20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 MYBPC3Q14896 1274 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 TLR1Q15399 786 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 MSANTD1Q6ZTZ1 278 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 GOT1L1Q8NHS2 421 aaPredicted RBP20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 C16orf52Q8NHV5 167 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 MAGED4Q96JG8 741 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 NPAS2Q99743 824 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 INPP5KQ9BT40 448 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 CCDC106Q9BWC9 280 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 NEUROD4Q9HD90 331 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 BCAP29Q9UHQ4 241 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 NBEAQ8NFP9 2946 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 NME6O75414 186 aaPredicted RBP20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 ZFAND5O76080 213 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 RAPSNQ13702 412 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 MAPKAPK3Q16644 382 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 ARMC10Q8N2F6 343 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 SIRT6Q8N6T7 355 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 OR4A15Q8NGL6 344 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 BCAS4Q8TDM0 211 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 GTF2H4Q92759 462 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 FAM120BQ96EK7 910 aaKnown RBP20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 DEFB126Q9BYW3 111 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 ZNF552Q9H707 407 aaPredicted RBP20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 DDX18Q9NVP1 670 aaKnown RBP20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 PCDHGB4Q9UN71 923 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 DTX4Q9Y2E6 619 aa20.93■□□□□ 0.94
SNRNP70-204ENST00000595231 EPG5Q9HCE0 2579 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 A0A1W2PP18 115 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 OR6C76A6NM76 312 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 A8MUI8 341 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 SLC22A2O15244 555 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 PRAMEF2O60811 474 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 BCAS2O75934 225 aaPredicted RBP20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 CPSF4O95639 269 aaKnown RBP20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 CDKN2CP42773 168 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 LRRC74AQ0VAA2 488 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 EBPQ15125 230 aaKnown RBP20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 LINC00303Q3SY05 128 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 B3GNTL1Q67FW5 361 aaPredicted RBP20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 SLC2A7Q6PXP3 512 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 THAP3Q8WTV1 239 aaPredicted RBP20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 TSPEARQ8WU66 669 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 LIN28AQ9H9Z2 209 aaKnown RBP20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.92■□□□□ 0.941e-6■■□□□ 12.6
SNRNP70-204ENST00000595231 SNX8Q9Y5X2 465 aa20.92■□□□□ 0.94
SNRNP70-204ENST00000595231 DYTNA2CJ06 578 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 MAN1A2O60476 641 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 SNRPB2P08579 225 aaKnown RBP20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 PAGE3Q5JUK9 113 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 FCRLBQ6BAA4 426 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 TCTN3Q6NUS6 607 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 TMEM64Q6YI46 380 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 PANX1Q96RD7 426 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 SLC6A13Q9NSD5 602 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 GPR83Q9NYM4 423 aa20.91■□□□□ 0.94
SNRNP70-204ENST00000595231 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 EMC8O43402 210 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 PTPN6P29350 595 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 SOX11P35716 441 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 CCT3P49368 545 aaKnown RBP20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 POLE2P56282 527 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 C16orf47Q6ZP98 133 aaPredicted RBP20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 NUBPLQ8TB37 319 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 TTC9Q92623 222 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 ADIPOR1Q96A54 375 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 GIMAP5Q96F15 307 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 WWTR1Q9GZV5 400 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 RMND5AQ9H871 391 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 C3orf14Q9HBI5 128 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 MYOTQ9UBF9 498 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 HEMK1Q9Y5R4 338 aaPredicted RBP20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 CAPN7Q9Y6W3 813 aa20.9■□□□□ 0.94
SNRNP70-204ENST00000595231 NDUFAB1O14561 156 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 RFXANKO14593 260 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 SLC29A4Q7RTT9 530 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 RPS19BP1Q86WX3 136 aaKnown RBP20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 TREML1Q86YW5 311 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 CLEC4FQ8N1N0 589 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 ZNF441Q8N8Z8 693 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 CCDC197Q8NCU1 140 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 NUP43Q8NFH3 380 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 OR5L2Q8NGL0 311 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 OR5AK3PQ8NH89 298 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 ITCHQ96J02 903 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 VSTM2LQ96N03 204 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 CDCP1Q9H5V8 836 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 ZCCHC3Q9NUD5 404 aaKnown RBP20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 CFL2Q9Y281 166 aa20.89■□□□□ 0.94
SNRNP70-204ENST00000595231 C2orf92A0A1B0GVN3 265 aa20.89■□□□□ 0.93
SNRNP70-204ENST00000595231 GSNP06396 782 aa20.89■□□□□ 0.93
SNRNP70-204ENST00000595231 PRKAG1P54619 331 aa20.89■□□□□ 0.93
SNRNP70-204ENST00000595231 PRR5P85299 388 aa20.89■□□□□ 0.93
SNRNP70-204ENST00000595231 GAB1Q13480 694 aa20.89■□□□□ 0.93
SNRNP70-204ENST00000595231 CRB2Q5IJ48 1285 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms