RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CYC1P08574 325 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 NR2F6P10588 404 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PPIBP23284 216 aaKnown RBP11.12□□□□□ -0.63
DDX39A-219ENST00000592927 OTX2P32243 289 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 SLC7A2P52569 658 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 EEFSECP57772 596 aaKnown RBP11.12□□□□□ -0.63
DDX39A-219ENST00000592927 TNFRSF17Q02223 184 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 RUNDC3AQ59EK9 446 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 NDUFAF5Q5TEU4 345 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 NANOGP8Q6NSW7 305 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 MED25Q71SY5 747 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 RAB43Q86YS6 212 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 C10orf67Q8IYJ2 551 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 GOT1L1Q8NHS2 421 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-219ENST00000592927 DNAJB14Q8TBM8 379 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 NUDT8Q8WV74 236 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 METTL21AQ8WXB1 218 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 TMEM125Q96AQ2 219 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 CLPTM1LQ96KA5 538 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PTCHD1Q96NR3 888 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 ANKRD27Q96NW4 1050 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 CSF3RQ99062 836 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 VN1R1Q9GZP7 353 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PAIP1Q9H074 479 aaKnown RBP11.12□□□□□ -0.63
DDX39A-219ENST00000592927 RPF2Q9H7B2 306 aaKnown RBP11.12□□□□□ -0.63
DDX39A-219ENST00000592927 NANOGQ9H9S0 305 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PRTFDC1Q9NRG1 225 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 SUCOQ9UBS9 1254 aaKnown RBP11.12□□□□□ -0.63
DDX39A-219ENST00000592927 CD300AQ9UGN4 299 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PSME2Q9UL46 239 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PCDHGB4Q9UN71 923 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 TP53TG5Q9Y2B4 290 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 PCDHA9Q9Y5H5 950 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 SCN3AQ9NY46 2000 aa11.12□□□□□ -0.63
DDX39A-219ENST00000592927 TRBV5-3A0A0A0MS03 114 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 CDC14CA4D256 554 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 OR2W5A6NFC9 320 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 K7EM74 188 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 PCDH17O14917 1159 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 ALOX12BO75342 701 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 AIFM1O95831 613 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 C8orf89P0DMQ9 161 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 PRKAR1AP10644 381 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 HSD17B1P14061 328 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 HOXB9P17482 250 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 MMP11P24347 488 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 FRKP42685 505 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 HSD17B7P56937 341 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 BTG2P78543 158 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 RHAGQ02094 409 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TRAP1Q12931 704 aaKnown RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 SLC13A2Q13183 592 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 RIPK1Q13546 671 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 IL10RAQ13651 578 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 CAPRIN1Q14444 709 aaKnown RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 MLC1Q15049 377 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 NSDHLQ15738 373 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 CRTC2Q53ET0 693 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 ZNF385BQ569K4 471 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 C18orf63Q68DL7 685 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 FAAH2Q6GMR7 532 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 QSOX2Q6ZRP7 698 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 HPS6Q86YV9 775 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TMEM151BQ8IW70 566 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 SLC15A3Q8IY34 581 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 SAMD14Q8IZD0 417 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TRIML2Q8N7C3 387 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TMEM52Q8NDY8 209 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 PLPP5Q8NEB5 264 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 OR5P2Q8WZ92 322 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TANKQ92844 425 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 NACC2Q96BF6 587 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 VPS50Q96JG6 964 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 IP6K3Q96PC2 410 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 PANX1Q96RD7 426 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 MUC13Q9H3R2 512 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 ACSS1Q9NUB1 689 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 CMTM6Q9NX76 183 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 TEX10Q9NXF1 929 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 SLAMF8Q9P0V8 285 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 C19orf25Q9UFG5 118 aaPredicted RBP11.11□□□□□ -0.63
DDX39A-219ENST00000592927 CORO2BQ9UQ03 480 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 PCDHB14Q9Y5E9 798 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 GMEB1Q9Y692 573 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 SEC16AO15027 2179 aa11.11□□□□□ -0.63
DDX39A-219ENST00000592927 NUP214P35658 2090 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 GLOD5A6NK44 160 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 EVPLLA8MZ36 301 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PEX12O00623 359 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 NME4O00746 187 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PDPK1O15530 556 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 MGRN1O60291 552 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 CTNSO60931 367 aa11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PRKRAO75569 313 aaKnown RBP11.1□□□□□ -0.63
DDX39A-219ENST00000592927 PDE5AO76074 875 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms