RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 UTS2RQ9UKP6 389 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 PSME2Q9UL46 239 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 BOKQ9UMX3 212 aaPredicted RBP12.76□□□□□ -0.37
APOC1-208ENST00000592535 ZNF780BQ9Y6R6 833 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 A0A1B0GVC2 190 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 SERTM1A2A2V5 107 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 CCDC151A5D8V7 595 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 CBX7O95931 251 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 PRF1P14222 555 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 DRD2P14416 443 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 CPA3P15088 417 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 PCSK2P16519 638 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 DNAJB13P59910 316 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 NAA20P61599 178 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 VSNL1P62760 191 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 MRPS35P82673 323 aaKnown RBP12.75□□□□□ -0.37
APOC1-208ENST00000592535 SLC18A2Q05940 514 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 SLC10A1Q14973 349 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 GXYLT1Q4G148 440 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 TRMT12Q53H54 448 aaKnown RBP12.75□□□□□ -0.37
APOC1-208ENST00000592535 BICRALQ6AI39 1079 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 GALNT18Q6P9A2 607 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 C17orf47Q8NEP4 570 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 OR5M9Q8NGP3 310 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 RDH11Q8TC12 318 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 SPPL2AQ8TCT8 520 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 EXOSC8Q96B26 276 aaKnown RBP12.75□□□□□ -0.37
APOC1-208ENST00000592535 SDCCAG3Q96C92 435 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 CTHRC1Q96CG8 243 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 C11orf24Q96F05 449 aaPredicted RBP12.75□□□□□ -0.37
APOC1-208ENST00000592535 JSRP1Q96MG2 331 aaPredicted RBP12.75□□□□□ -0.37
APOC1-208ENST00000592535 DOHHQ9BU89 302 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 ITPAQ9BY32 194 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 SHCBP1LQ9BZQ2 653 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 LDAHQ9H6V9 325 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 ZFP64Q9NPA5 681 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 CHST11Q9NPF2 352 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 PFDN4Q9NQP4 134 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 OXSMQ9NWU1 459 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 PLLPQ9Y342 182 aa12.75□□□□□ -0.37
APOC1-208ENST00000592535 NOTCH2Q04721 2471 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 ARHGAP21Q5T5U3 1957 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 CRYBG3Q68DQ2 2970 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 TLDC2A0PJX2 215 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 OR14I1A6ND48 311 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 CAPN14A8MX76 684 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 AQP7O14520 342 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 TP53I11O14683 189 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 BCKDKO14874 412 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 CRCPO75575 148 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 SNRPB2P08579 225 aaKnown RBP12.74□□□□□ -0.37
APOC1-208ENST00000592535 ENDOUP21128 410 aaKnown RBP12.74□□□□□ -0.37
APOC1-208ENST00000592535 ABCD3P28288 659 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 MAN2A2P49641 1150 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 TMED10P49755 219 aaKnown RBP12.74□□□□□ -0.37
APOC1-208ENST00000592535 NRG3P56975 720 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 ZNF628Q5EBL2 1059 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 CFAP157Q5JU67 520 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 TICAM1Q8IUC6 712 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 CCDC116Q8IYX3 515 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 OR52R1Q8NGF1 315 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 EXO5Q9H790 373 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 ANKRA2Q9H9E1 313 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 SIRT5Q9NXA8 310 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 COQ3Q9NZJ6 369 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 CFL2Q9Y281 166 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 PKDREJQ9NTG1 2253 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 HCFC1P51610 2035 aa12.74□□□□□ -0.37
APOC1-208ENST00000592535 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 ANKRD33BA6NCL7 494 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 H3BQF6 201 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 SUSD5O60279 629 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 HCN1O60741 890 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 TRIM3O75382 744 aaPredicted RBP12.73□□□□□ -0.37
APOC1-208ENST00000592535 ANXA4P09525 319 aaPredicted RBP12.73□□□□□ -0.37
APOC1-208ENST00000592535 NUP107P57740 925 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 HEPACAMQ14CZ8 416 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 PCLAFQ15004 111 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 IMPG1Q17R60 797 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 TBCELQ5QJ74 424 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 LIPMQ5VYY2 423 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 ZNF585AQ6P3V2 769 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 C10orf107Q8IVU9 208 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 OR9A2Q8NGT5 310 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 CDC26Q8NHZ8 85 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 ZNF675Q8TD23 568 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 CA5BP1Q8WTZ4 195 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 KAT2AQ92830 837 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
APOC1-208ENST00000592535 ZNF597Q96LX8 424 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 RILPQ96NA2 401 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 SECISBP2Q96T21 854 aaKnown RBP12.73□□□□□ -0.37
APOC1-208ENST00000592535 SLC6A15Q9H2J7 730 aa12.73□□□□□ -0.37
APOC1-208ENST00000592535 RNF6Q9Y252 685 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms