RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 OLFM1Q99784 485 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 MACROD1Q9BQ69 325 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 NAT9Q9BTE0 207 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 PARVBQ9HBI1 364 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 CCDC177Q9NQR7 707 aaPredicted RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 LIN7CQ9NUP9 197 aaKnown RBP7.05□□□□□ -1.28
VMP1-213ENST00000591877 ASF1BQ9NVP2 202 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TAS2R13Q9NYV9 303 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 TRPC4Q9UBN4 977 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 STEAP1Q9UHE8 339 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 C3orf18Q9UK00 162 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 VPS4AQ9UN37 437 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 CHMP2BQ9UQN3 213 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 B3GNT3Q9Y2A9 372 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 PSAT1Q9Y617 370 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 SAR1BQ9Y6B6 198 aa7.05□□□□□ -1.28
VMP1-213ENST00000591877 SPTBN1Q01082 2364 aaKnown RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 KCNE1BA0A087WTH5 132 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 FEZF1A0PJY2 475 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 MARCH11A6NNE9 402 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 IDSB3KWA1 339 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 E7ESA3 106 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 FZD7O75084 574 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 JRKO75564 520 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 CBX6O95503 412 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 HPP00738 406 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 ALPPP05187 535 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 C8GP07360 202 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 CELA2AP08217 269 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 COX6A1P12074 109 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 RGS4P49798 205 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 EMP2P54851 167 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 MRPS25P82663 173 aaKnown RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 NAE1Q13564 534 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 FAM53BQ14153 422 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 FRG1Q14331 258 aaKnown RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 EIF2S3LQ2VIR3 472 aaKnown RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 NRN1LQ496H8 165 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 GALNTL6Q49A17 601 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 HECTD2Q5U5R9 776 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 LRRC8EQ6NSJ5 796 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 TMEM205Q6UW68 189 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 LCTLQ6UWM7 567 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 IQCKQ8N0W5 287 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 PDIK1LQ8N165 341 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 TMEM132CQ8N3T6 1108 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 ZADH2Q8N4Q0 377 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 OR9A4Q8NGU2 314 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 PPP4R1Q8TF05 950 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 TMEM171Q8WVE6 324 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 RERGQ96A58 199 aaPredicted RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 PYCR2Q96C36 320 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 LRRC39Q96DD0 335 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 CFAP36Q96G28 342 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 THOC3Q96J01 351 aaKnown RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 OR4K3Q96R72 315 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 NAPGQ99747 312 aaPredicted RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 TREX2Q9BQ50 279 aaPredicted RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 WDR77Q9BQA1 342 aaPredicted RBP7.04□□□□□ -1.28
VMP1-213ENST00000591877 TRIM31Q9BZY9 425 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 LHPPQ9H008 270 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 DRC3Q9H069 523 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 SPNS1Q9H2V7 528 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 ZNF160Q9HCG1 818 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 KCNK9Q9NPC2 374 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 CDC14AQ9UNH5 594 aa7.04□□□□□ -1.28
VMP1-213ENST00000591877 ZGRF1Q86YA3 2104 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 LOC102723996A0A087X1L8 192 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 IGHV1-45A0A0A0MS14 117 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 CTAGE15A4D2H0 777 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 FAM90A20PA6NIJ5 464 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 CCDC188H7C350 402 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 TXNDC9O14530 226 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 MAP2K7O14733 419 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 KLHL41O60662 606 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 DNAJB6O75190 326 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 PIAS1O75925 651 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 BMP10O95393 424 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 NSA2O95478 260 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 ELANEP08246 267 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 PRR35P0CG20 571 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 CDH1P12830 882 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 IL1RNP18510 177 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 HRH2P25021 359 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 RPL21P46778 160 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 RPS15AP62244 130 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 EEF1A2Q05639 463 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 SF3A3Q12874 501 aaKnown RBP eCLIP7.03□□□□□ -1.28
VMP1-213ENST00000591877 PDIA2Q13087 525 aaKnown RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 MFAP5Q13361 173 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 PPP1R3AQ16821 1122 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 FHL5Q5TD97 284 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 AGAP7PQ5VUJ5 663 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 ATG16L1Q676U5 607 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 B3GNTL1Q67FW5 361 aaPredicted RBP7.03□□□□□ -1.28
VMP1-213ENST00000591877 FAM45BPQ6NSW5 357 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 SBSNQ6UWP8 590 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 CTAGE6Q86UF2 777 aa7.03□□□□□ -1.28
VMP1-213ENST00000591877 SLC26A11Q86WA9 606 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms