RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 HPCAL1P37235 193 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 PER3P56645 1201 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 UFM1P61960 85 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 MRPS35P82673 323 aaKnown RBP19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 DUSP8Q13202 625 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 SPRED3Q2MJR0 410 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 ACAD11Q709F0 780 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 GALNT12Q8IXK2 581 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 OR1N1Q8NGS0 311 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 TM9SF4Q92544 642 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 KAT2AQ92830 837 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 ZNF764Q96H86 408 aaPredicted RBP19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 FBXL20Q96IG2 436 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 PELOQ9BRX2 385 aaKnown RBP19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 LIN28AQ9H9Z2 209 aaKnown RBP19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 AGPAT4Q9NRZ5 378 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 PTGFRNQ9P2B2 879 aa19.93■□□□□ 0.78
R3HDM4-206ENST00000590454 LRBAP50851 2863 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 A0A0G2JND7 137 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 SYNDIG1LA6NDD5 238 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 PRF1P14222 555 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 PCSK2P16519 638 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 NCBP2P52298 156 aaKnown RBP eCLIP19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 SEC24CP53992 1094 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 C21orf58P58505 322 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 TRMT12Q53H54 448 aaKnown RBP19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 ZNF628Q5EBL2 1059 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 C16orf47Q6ZP98 133 aaPredicted RBP19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 ZNF551Q7Z340 670 aaPredicted RBP19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 ST6GALNAC3Q8NDV1 305 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 THAP3Q8WTV1 239 aaPredicted RBP19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 MTERF3Q96E29 417 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 VMP1Q96GC9 406 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 AMDHD1Q96NU7 426 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 CCDC28BQ9BUN5 200 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 BRINP2Q9C0B6 783 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 GIMAP4Q9NUV9 329 aa19.92■□□□□ 0.78
R3HDM4-206ENST00000590454 TMEM200CA6NKL6 621 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 UBDO15205 165 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 PDPK1O15530 556 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 NME6O75414 186 aaPredicted RBP19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 SOX11P35716 441 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 CLCN2P51788 898 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 MAP4K2Q12851 820 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 EXOSC7Q15024 291 aaKnown RBP19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 PGS1Q32NB8 556 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 CPTPQ5TA50 214 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 SP5Q6BEB4 398 aaPredicted RBP19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 H3F3CQ6NXT2 135 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 LINC00696Q6ZRV3 163 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 R3HCC1LQ7Z5L2 792 aaKnown RBP19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 ZADH2Q8N4Q0 377 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 C7orf57Q8NEG2 295 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 CTHRC1Q96CG8 243 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 COQ8BQ96D53 544 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 DPY30Q9C005 99 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 ZNF639Q9UID6 485 aa19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 ANKRD17O75179 2603 aaKnown RBP19.91■□□□□ 0.78
R3HDM4-206ENST00000590454 LRRTM2O43300 516 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 CBX7O95931 251 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 NTSP30990 170 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 LSP1P33241 339 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 MPIP34949 423 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 FRKP42685 505 aaPredicted RBP19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 SLC37A1P57057 533 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 PHC1P78364 1004 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 FUT7Q11130 342 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 Q6ZS92 163 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 C9orf40Q8IXQ3 194 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 VWA5B2Q8N398 1253 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 OR7G2Q8NG99 324 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 TMEM120AQ9BXJ8 343 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 DEFB126Q9BYW3 111 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 RUBCNLQ9H714 662 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 NTNG1Q9Y2I2 539 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 PCDHGA10Q9Y5H3 936 aa19.9■□□□□ 0.78
R3HDM4-206ENST00000590454 IDO1P14902 403 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 CD1EP15812 388 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 ZFP36L2P47974 494 aaKnown RBP19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 CDK9P50750 372 aaKnown RBP19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 WNT3P56703 355 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 HSPB3Q12988 150 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 AGAP7PQ5VUJ5 663 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 IRAK1BP1Q5VVH5 260 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 OR4F3Q6IEY1 312 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 TMEM107Q6UX40 140 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 SAMD14Q8IZD0 417 aaPredicted RBP19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 CPAMD8Q8IZJ3 1885 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 FAM9CQ8IZT9 166 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 ZNF615Q8N8J6 731 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 OR9I1Q8NGQ6 314 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 ZNF675Q8TD23 568 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 CHMP6Q96FZ7 201 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 AGAP4Q96P64 663 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 CDCP1Q9H5V8 836 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 DTX4Q9Y2E6 619 aa19.89■□□□□ 0.77
R3HDM4-206ENST00000590454 DYRK3O43781 588 aa19.88■□□□□ 0.77
R3HDM4-206ENST00000590454 F10P00742 488 aa19.88■□□□□ 0.77
R3HDM4-206ENST00000590454 TROVE2P10155 538 aaKnown RBP eCLIP19.88■□□□□ 0.77
R3HDM4-206ENST00000590454 GRNP28799 593 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms