RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 APH1BQ8WW43 257 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RLN3Q8WXF3 142 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RSC1A1Q92681 617 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 BMFQ96LC9 184 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ALPK1Q96QP1 1244 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 GSDMCQ9BYG8 508 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 SERHL2Q9H4I8 314 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 KLHL31Q9H511 634 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 TRIM45Q9H8W5 580 aaPredicted RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 LIN28AQ9H9Z2 209 aaKnown RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 C3orf14Q9HBI5 128 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ACER3Q9NUN7 267 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ZNF624Q9P2J8 865 aaPredicted RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 SEC14L3Q9UDX4 400 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 WARS2Q9UGM6 360 aaKnown RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 APOBEC3BQ9UH17 382 aaKnown RBP9.38□□□□□ -0.91
VPS25-202ENST00000589219 ACAD8Q9UKU7 415 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 MGAT4BQ9UQ53 548 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 RNF6Q9Y252 685 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 SLC9A8Q9Y2E8 581 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 SH3GLB1Q9Y371 365 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ENTPD2Q9Y5L3 495 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 ZNF780BQ9Y6R6 833 aa9.38□□□□□ -0.91
VPS25-202ENST00000589219 EPG5Q9HCE0 2579 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 A0A0G2JPF8 293 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 A0A1W2PPW3 197 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 A0A1W2PR48 441 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 OR5K4A6NMS3 321 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 HNRNPCL2B2RXH8 293 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 HNRNPCL3B7ZW38 293 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 PTGES3LE9PB15 166 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 PRAMEF26H0Y7S4 382 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SYT5O00445 386 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SLC22A1O15245 554 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 WBP4O75554 376 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 AGR2O95994 175 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 BCL10O95999 233 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 TNFP01375 233 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 MT-ND2P03891 347 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 H1F0P07305 194 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 IFI6P09912 130 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 HNRNPCL4P0DMR1 293 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 NR2F1P10589 423 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 CDK4P11802 303 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 CEACAM1P13688 526 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 UGT2B7P16662 529 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 GABRG2P18507 467 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 CSRP1P21291 193 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 AK4P27144 223 aaPredicted RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 ACSL1P33121 698 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 MPIP34949 423 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 UGT2B15P54855 530 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 GP2P55259 537 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 CDC42P60953 191 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 RPL6Q02878 288 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 MAPK11Q15759 364 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 TBCEQ15813 527 aaPredicted RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 NDUFA9Q16795 377 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 ST3GAL2Q16842 350 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 TPRG1LQ5T0D9 272 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SYT6Q5T7P8 510 aaPredicted RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 AP1ARQ63HQ0 302 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 VN1R4Q7Z5H5 301 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 CCDC71Q8IV32 467 aaPredicted RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 RBM12BQ8IXT5 1001 aaKnown RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 AQP11Q8NBQ7 271 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 CAMKVQ8NCB2 501 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 OR4E2Q8NGC2 313 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SGCDQ92629 289 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 MYDGFQ969H8 173 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 COL21A1Q96P44 957 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SIGLEC11Q96RL6 698 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SERINC2Q96SA4 455 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 TREX2Q9BQ50 279 aaPredicted RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 DCUN1D5Q9BTE7 237 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 PINK1Q9BXM7 581 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 DGCR6LQ9BY27 220 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 NMNAT1Q9HAN9 279 aaPredicted RBP9.37□□□□□ -0.91
VPS25-202ENST00000589219 PLGRKTQ9HBL7 147 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 IMPAD1Q9NX62 359 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 ACTR10Q9NZ32 417 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 ERVK-18Q9QC07 812 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 TRPC4Q9UBN4 977 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 FTSJ1Q9UET6 329 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 CES1P1Q9UKY3 287 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 LIPT1Q9Y234 373 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 ATG4BQ9Y4P1 393 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 SNX11Q9Y5W9 270 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 GON4LQ3T8J9 2241 aa9.37□□□□□ -0.91
VPS25-202ENST00000589219 KIR2DS5A0A0G2JLQ3 304 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 A0A0G2JNG1 304 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SH3D21A4FU49 640 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms