RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ARMC10Q8N2F6 343 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 CPSF7Q8N684 471 aaKnown RBP18.19■□□□□ 0.5
CIRBP-220ENST00000588917 ZNF615Q8N8J6 731 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 NUBPLQ8TB37 319 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 OR52E6Q96RD3 313 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 SMAD5Q99717 465 aaKnown RBP18.19■□□□□ 0.5
CIRBP-220ENST00000588917 RMND5AQ9H871 391 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 NEUROD4Q9HD90 331 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 SLAMF7Q9NQ25 335 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 BTNL2Q9UIR0 455 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 C19orf53Q9UNZ5 99 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-220ENST00000588917 ZNF451Q9Y4E5 1061 aa18.19■□□□□ 0.5
CIRBP-220ENST00000588917 FCHO1O14526 889 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 SNX3O60493 162 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 COQ9O75208 318 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 CELA2AP08217 269 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 IL12AP29459 219 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 ADSLP30566 484 aaPredicted RBP18.18■□□□□ 0.5
CIRBP-220ENST00000588917 SSTR4P31391 388 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 DCAF7P61962 342 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 PRR5P85299 388 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 HSPB3Q12988 150 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 LTB4RQ15722 352 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 TCTN3Q6NUS6 607 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 BHLHB9Q6PI77 547 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
CIRBP-220ENST00000588917 SIRT6Q8N6T7 355 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 PSMA8Q8TAA3 256 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 C10orf82Q8WW14 230 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 KAT2AQ92830 837 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 TP53INP1Q96A56 240 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 MOAP1Q96BY2 351 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 CDCP1Q9H5V8 836 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 EPS8L2Q9H6S3 715 aa18.18■□□□□ 0.5
CIRBP-220ENST00000588917 DDX18Q9NVP1 670 aaKnown RBP18.18■□□□□ 0.5
CIRBP-220ENST00000588917 YARS2Q9Y2Z4 477 aaKnown RBP18.18■□□□□ 0.5
CIRBP-220ENST00000588917 C2orf92A0A1B0GVN3 265 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 HRKO00198 91 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 EMC8O43402 210 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 SHOX2O60902 331 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-220ENST00000588917 SOX30O94993 753 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 MRPS35P82673 323 aaKnown RBP18.17■□□□□ 0.5
CIRBP-220ENST00000588917 SF3A3Q12874 501 aaKnown RBP eCLIP18.17■□□□□ 0.52e-13■■■□□ 18
CIRBP-220ENST00000588917 AGKQ53H12 422 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 ACER2Q5QJU3 275 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 BLOC1S3Q6QNY0 202 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 TMEM107Q6UX40 140 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 PIGWQ7Z7B1 504 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 OR2L13Q8N349 312 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 KIF2BQ8N4N8 673 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 ZNF321PQ8N8H1 164 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 C17orf47Q8NEP4 570 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 OR7G2Q8NG99 324 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 OR52R1Q8NGF1 315 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 DOK4Q8TEW6 326 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 TSPEARQ8WU66 669 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 NUDT8Q8WV74 236 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 ABHD17AQ96GS6 310 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 CCDC167Q9P0B6 97 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 NTMQ9P121 344 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 MYOTQ9UBF9 498 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 ZNF223Q9UK11 482 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-220ENST00000588917 PCSK5Q92824 1860 aa18.17■□□□□ 0.5
CIRBP-220ENST00000588917 CCDC154A6NI56 674 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 TTC36A6NLP5 189 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 UPK1AO00322 258 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 SCN2BO60939 215 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 C6orf47O95873 294 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 SOX11P35716 441 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 MC3RP41968 323 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 DGKQP52824 942 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 WNT3P56703 355 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 PSPHP78330 225 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 MFAP5Q13361 173 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 RAPSNQ13702 412 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 MAPKAPK3Q16644 382 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 FHL5Q5TD97 284 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 ZCCHC12Q6PEW1 402 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 TMEM64Q6YI46 380 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 SLC15A4Q8N697 577 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 TRIML2Q8N7C3 387 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 C16orf52Q8NHV5 167 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 CCDC115Q96NT0 180 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 CCT8L2Q96SF2 557 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 ZNF385DQ9H6B1 395 aa18.16■□□□□ 0.5
CIRBP-220ENST00000588917 SLC22A2O15244 555 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 CBX7O95931 251 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 FAM107AO95990 144 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 CLPSP04118 112 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 CCT3P49368 545 aaKnown RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 EMDP50402 254 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 MLF1P58340 268 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 HBA1P69905 142 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 PHC1P78364 1004 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 RCAN2Q14206 197 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 EXOSC7Q15024 291 aaKnown RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 EBPQ15125 230 aaKnown RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 ZNHIT3Q15649 155 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-220ENST00000588917 SPDYE7PQ495Y7 208 aa18.15■□□□□ 0.5
CIRBP-220ENST00000588917 IGFL2Q6UWQ7 119 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms