RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CLIP3Q96DZ5 547 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 SEPHS2Q99611 448 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 PKP2Q99959 881 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 EFHD1Q9BUP0 239 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 EQTNQ9NQ60 294 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 CTSFQ9UBX1 484 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 ZNF639Q9UID6 485 aa24.33■■□□□ 1.49
SCAMP4-210ENST00000588555 IGLV3-12A0A075B6K2 115 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 S1PR1P21453 382 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 RORAP35398 523 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 TXNL4AP83876 142 aaKnown RBP24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 RHAGQ02094 409 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 SERTAD2Q14140 314 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 NKAIN1Q4KMZ8 207 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 CDCP2Q5VXM1 449 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 SLC30A8Q8IWU4 369 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 GALNT12Q8IXK2 581 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 VWA5B2Q8N398 1253 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 OTUB1Q96FW1 271 aaPredicted RBP24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 RBM18Q96H35 190 aaKnown RBP24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 PTCHD1Q96NR3 888 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 ACTRT3Q9BYD9 372 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 KIF26BQ2KJY2 2108 aa24.32■■□□□ 1.48
SCAMP4-210ENST00000588555 CBX7O95931 251 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 BCHEP06276 602 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 BIKQ13323 160 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 EXOSC6Q5RKV6 272 aaKnown RBP24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 INTS11Q5TA45 600 aaKnown RBP24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 REEP3Q6NUK4 255 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 CBLL1Q75N03 491 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 TMEM102Q8N9M5 508 aaPredicted RBP24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 LRTOMTQ8WZ04 291 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 POP5Q969H6 163 aaKnown RBP24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 TMEM19Q96HH6 336 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 DGAT2Q96PD7 388 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 OR7D2Q96RA2 312 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 UGT2B28Q9BY64 529 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 TGIF2Q9GZN2 237 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 SAMD4AQ9UPU9 718 aaKnown RBP24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 ANGPT4Q9Y264 503 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 PCDHGA1Q9Y5H4 931 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 TMEM229AB2RXF0 380 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 B4E171 279 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 ASNA1O43681 348 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 TIPRLO75663 272 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 TSPAN7P41732 249 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 ANXA11P50995 505 aaKnown RBP24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 MAPK10P53779 464 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 FUT5Q11128 374 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 STPG1Q5TH74 334 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 LRRC74BQ6ZQY2 392 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 XAGE5Q8WWM1 108 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 RIT1Q92963 219 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 P2RX2Q9UBL9 471 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 KCNE3Q9Y6H6 103 aa24.31■■□□□ 1.48
SCAMP4-210ENST00000588555 HNRNPRO43390 633 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 RAP2AP10114 183 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 GALNSP34059 522 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 DCDP81605 110 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 DUSP8Q13202 625 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 EXOSC7Q15024 291 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 MINDY4Q4G0A6 757 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 FAM98BQ52LJ0 330 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 CRB2Q5IJ48 1285 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 CDC73Q6P1J9 531 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 EIF3MQ7L2H7 374 aaKnown RBP24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 TSLPQ969D9 159 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 PMEPA1Q969W9 287 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 PYURFQ96I23 114 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 RNF145Q96MT1 663 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 CMKLR1Q99788 373 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 ADAP2Q9NPF8 381 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 RPS6KA6Q9UK32 745 aa24.3■■□□□ 1.48
SCAMP4-210ENST00000588555 PCNX2A6NKB5 2137 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 CASQ2O14958 399 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 FOXD2O60548 495 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 RECKO95980 971 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 SYPL1Q16563 259 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 HMBOX1Q6NT76 420 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 ERMP1Q7Z2K6 904 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 WDR53Q7Z5U6 358 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 METTL25Q8N6Q8 603 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 SLC16A11Q8NCK7 471 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 OR10Q1Q8NGQ4 319 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 PELOQ9BRX2 385 aaKnown RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 CHID1Q9BWS9 393 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 MAGIXQ9H6Y5 334 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 ZNF451Q9Y4E5 1061 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 CPNE3O75131 537 aaKnown RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 ZNF682O95780 498 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 ZNF28P17035 718 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 CLCN2P51788 898 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 CLDN6P56747 220 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 CHRNB3Q05901 458 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 ISXQ2M1V0 245 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 MFSD4BQ5TF39 518 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 GLRX5Q86SX6 157 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 LAPTM4BQ86VI4 370 aa24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 SLC44A2Q8IWA5 706 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-210ENST00000588555 STT3BQ8TCJ2 826 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms