RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	TCTN3	Q6NUS6	607 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DEF8	Q6ZN54	512 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	BTLA	Q7Z6A9	289 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	AKAP14	Q86UN6	197 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HEATR4	Q86WZ0	1026 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CADM3	Q8N126	398 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PARP16	Q8N5Y8	322 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NANOGP1	Q8N7R0	232 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SCAI	Q8N9R8	606 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	OR2L8	Q8NGY9	312 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	GNPDA2	Q8TDQ7	276 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SMG7	Q92540	1137 aa	Known RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	EXOSC8	Q96B26	276 aa	Known RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PRRC1	Q96M27	445 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC38A2	Q96QD8	506 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	FERD3L	Q96RJ6	166 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TEX101	Q9BY14	249 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZNF717	Q9BY31	904 aa	Predicted RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	OR51E2	Q9H255	320 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SPNS1	Q9H2V7	528 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ARMC7	Q9H6L4	198 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC35C2	Q9NQQ7	365 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	LYAR	Q9NX58	379 aa	Known RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KLHL28	Q9NXS3	571 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TRPC4	Q9UBN4	977 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CDV3	Q9UKY7	258 aa	Known RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HCN2	Q9UL51	889 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DIMT1	Q9UNQ2	313 aa	Known RBP	13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ENTPD4	Q9Y227	616 aa		13.27	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DCDC2B	A2VCK2	349 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TBC1D3B	A6NDS4	549 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PRRT4	C9JH25	899 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ANHX	E9PGG2	379 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ARHGAP33	O14559	1287 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DSCR3	O14972	297 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TBX1	O43435	398 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ATP6V1G1	O75348	118 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	FH	P07954	510 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NR2F6	P10588	404 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	EPCAM	P16422	314 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	P2RY2	P41231	377 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PCYT1A	P49585	367 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CASP9	P55211	416 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	LIM2	P55344	173 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TAS2R38	P59533	333 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NTHL1	P78549	312 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DNASE1L3	Q13609	305 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	C3orf38	Q5JPI3	329 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ENTPD8	Q5MY95	495 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ATAD3B	Q5T9A4	648 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KIAA1161	Q6NSJ0	714 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PGBD2	Q6P3X8	592 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CCDC190	Q86UF4	302 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ADGRF3	Q8IZF5	1079 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC34A3	Q8N130	599 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZNF366	Q8N895	744 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ING5	Q8WYH8	240 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	AP3S1	Q92572	193 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HPS1	Q92902	700 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SMARCD2	Q92925	531 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NXPE3	Q969Y0	559 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	WDFY2	Q96P53	400 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	IL17F	Q96PD4	163 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	COQ7	Q99807	217 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TREX2	Q9BQ50	279 aa	Predicted RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ALOXE3	Q9BYJ1	711 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ROGDI	Q9GZN7	287 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MRPS18A	Q9NVS2	196 aa	Known RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TMEM98	Q9Y2Y6	226 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZFHX4	Q86UP3	3567 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NOTCH4	Q99466	2003 aa		13.26	□□□□□ -0.29
NEDD4L-223	ENST00000588516		A0A0A6YYD5	115 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TRBV4-1	A0A0J9YWV2	114 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DUXA	A6NLW8	204 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZNF670-ZNF695	F2Z2N8	137 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516		H7BY64	318 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	FFAR1	O14842	300 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	LGI1	O95970	557 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	IL1A	P01583	271 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CSNK2A2	P19784	350 aa	Predicted RBP	13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MPI	P34949	423 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	STXBP1	P61764	594 aa	Known RBP	13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CSNK1G2	P78368	415 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RAB40B	Q12829	278 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SEC23B	Q15437	767 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MAPK11	Q15759	364 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	NDUFA5	Q16718	116 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	INAVA	Q3KP66	663 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	STEAP3	Q658P3	488 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	C1orf94	Q6P1W5	598 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RRM2B	Q7LG56	351 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ATCAY	Q86WG3	371 aa		13.25	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MMAA	Q8IVH4	418 aa	Known RBP	13.25	□□□□□ -0.29

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