RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CLPSP04118 112 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 HMGN2P05204 90 aaKnown RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 HEXBP07686 556 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 IFI6P09912 130 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 BMP2P12643 396 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 TNNI3P19429 210 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 GGT1P19440 569 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 S1PR1P21453 382 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 MATN1P21941 496 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 SSTR4P31391 388 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 SLC5A2P31639 672 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 GALNSP34059 522 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 DSTNP60981 165 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 GABREP78334 506 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 BNIP2Q12982 314 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 FADDQ13158 208 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 FLOT2Q14254 428 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 ZNF267Q14586 743 aaPredicted RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 LASP1Q14847 261 aaKnown RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 NCF4Q15080 339 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 NSDHLQ15738 373 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 VMACQ2NL98 169 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 GCNT6Q5T4J0 391 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 C6orf15Q6UXA7 325 aaPredicted RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 TMPRSS7Q7RTY8 843 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 WDR53Q7Z5U6 358 aaPredicted RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 PTRH1Q86Y79 214 aaKnown RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 VWA5B2Q8N398 1253 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 AMER2Q8N7J2 671 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 HIPK4Q8NE63 616 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 OR5D16Q8NGK9 328 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 PTPMT1Q8WUK0 201 aaPredicted RBP10.55□□□□□ -0.72
VMP1-207ENST00000588131 RAB8BQ92930 207 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 MAL2Q969L2 176 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 MS4A4EQ96PG1 132 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 CNPPD1Q9BV87 410 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 OR51I1Q9H343 314 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 RAD21L1Q9H4I0 556 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 ADAP2Q9NPF8 381 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 EQTNQ9NQ60 294 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 ERVK-19Q9WJR5 959 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 PCDHGA8Q9Y5G5 932 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 SNX13Q9Y5W8 968 aa10.55□□□□□ -0.72
VMP1-207ENST00000588131 IGHV3-20A0A0C4DH32 117 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 PRAMEF27A3QJZ7 478 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 C9J4A7 227 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 HMGN4O00479 90 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 SNPHO15079 494 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ALOX12BO75342 701 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ENTPD5O75356 428 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 OR12D1P0DN82 309 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ACP2P11117 423 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 MAN2A2P49641 1150 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 KHKP50053 298 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 PGDP52209 483 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 EMP2P54851 167 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ACTR3P61158 418 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 TRAP1Q12931 704 aaKnown RBP10.54□□□□□ -0.72
VMP1-207ENST00000588131 BIKQ13323 160 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ELAVL1Q15717 326 aaKnown RBP10.54□□□□□ -0.72
VMP1-207ENST00000588131 MAPK11Q15759 364 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 EXOSC6Q5RKV6 272 aaKnown RBP10.54□□□□□ -0.72
VMP1-207ENST00000588131 C6orf163Q5TEZ5 329 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 TMEM164Q5U3C3 297 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 GLYATQ6IB77 296 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 LCN8Q6JVE9 175 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 MFSD12Q6NUT3 480 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 BHLHB9Q6PI77 547 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 CYP2R1Q6VVX0 501 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ANKRD37Q7Z713 158 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 DHFR2Q86XF0 187 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ZNF321PQ8N8H1 164 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 ENDOVQ8N8Q3 282 aaKnown RBP10.54□□□□□ -0.72
VMP1-207ENST00000588131 BHLHE22Q8NFJ8 381 aaPredicted RBP10.54□□□□□ -0.72
VMP1-207ENST00000588131 OR52R1Q8NGF1 315 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 MIPOL1Q8TD10 442 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 CT55Q8WUE5 264 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 OR7D2Q96RA2 312 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 CRB3Q9BUF7 120 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 SPATA9Q9BWV2 254 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 WDR54Q9H977 334 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 POLR1BQ9H9Y6 1135 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 C3orf18Q9UK00 162 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 KCNE3Q9Y6H6 103 aa10.54□□□□□ -0.72
VMP1-207ENST00000588131 SDK2Q58EX2 2172 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 CXCR6O00574 342 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 GSTA4O15217 222 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 KLF7O75840 302 aaPredicted RBP10.53□□□□□ -0.72
VMP1-207ENST00000588131 DDAH2O95865 285 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 UMODP07911 640 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 CCNYL3P0C7X3 344 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 ARAFP10398 606 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 PCGF2P35227 344 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 EEF1A2Q05639 463 aaKnown RBP10.53□□□□□ -0.72
VMP1-207ENST00000588131 FUT7Q11130 342 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 SFT2D3Q587I9 215 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 CDC73Q6P1J9 531 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 ERICH5Q6P6B1 374 aa10.53□□□□□ -0.72
VMP1-207ENST00000588131 SPPL2CQ8IUH8 684 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms