RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 OR2L13Q8N349 312 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 ZSCAN1Q8NBB4 408 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 NFAM1Q8NET5 270 aaPredicted RBP13.15□□□□□ -0.3
CCDC130-208ENST00000588071 ZNF721Q8TF20 911 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 ZFP90Q8TF47 636 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 NCLNQ969V3 563 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 VMP1Q96GC9 406 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 ANKRD27Q96NW4 1050 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 CCNL2Q96S94 520 aaPredicted RBP13.15□□□□□ -0.3
CCDC130-208ENST00000588071 SH3GL1Q99961 368 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 SLC39A3Q9BRY0 314 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 THUMPD3Q9BV44 507 aaKnown RBP13.15□□□□□ -0.3
CCDC130-208ENST00000588071 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 TRIM4Q9C037 500 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 EQTNQ9NQ60 294 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 SLC25A37Q9NYZ2 338 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 PRODH2Q9UF12 536 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 FAF1Q9UNN5 650 aaPredicted RBP13.15□□□□□ -0.3
CCDC130-208ENST00000588071 CFL2Q9Y281 166 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
CCDC130-208ENST00000588071 NKX2-8O15522 239 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 PRAMEF2O60811 474 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 HNRNPCL1O60812 293 aaKnown RBP13.14□□□□□ -0.31
CCDC130-208ENST00000588071 UNC5CO95185 931 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 CBX7O95931 251 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 HPP00738 406 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 MATN1P21941 496 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 PTPN6P29350 595 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 SOX18P35713 384 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 CLCN2P51788 898 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 CASP9P55211 416 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 PSME3P61289 254 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 ATP1A4Q13733 1029 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 LASP1Q14847 261 aaKnown RBP13.14□□□□□ -0.31
CCDC130-208ENST00000588071 FHL5Q5TD97 284 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 HLA-DQA1Q5Y7H0 255 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 NANOGP8Q6NSW7 305 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 LRRC69Q6ZNQ3 347 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 MRGPREQ86SM8 312 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 RNF130Q86XS8 419 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 MSRB3Q8IXL7 192 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 ZNF321PQ8N8H1 164 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 RBM15BQ8NDT2 890 aaKnown RBP13.14□□□□□ -0.31
CCDC130-208ENST00000588071 SIMC1Q8NDZ2 872 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 PNPT1Q8TCS8 783 aaKnown RBP13.14□□□□□ -0.31
CCDC130-208ENST00000588071 ADAMTS17Q8TE56 1095 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 NEURL3Q96EH8 262 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
CCDC130-208ENST00000588071 SLC35G5Q96KT7 338 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 IMMP1LQ96LU5 166 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 FER1L6-AS2Q96M78 137 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 MS4A4EQ96PG1 132 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 YIPF4Q9BSR8 244 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 RAD21L1Q9H4I0 556 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 NANOGQ9H9S0 305 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 ZNF160Q9HCG1 818 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 NTMQ9P121 344 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 CORO2BQ9UQ03 480 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 L3MBTL1Q9Y468 752 aa13.14□□□□□ -0.31
CCDC130-208ENST00000588071 TRBV5-3A0A0A0MS03 114 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 C15orf38-AP3S2A0A0A6YYH1 394 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 GYG2O15488 501 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 NME6O75414 186 aaPredicted RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 IGKV3-11P04433 115 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 HOXB9P17482 250 aaPredicted RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 EIF2S3P41091 472 aaKnown RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 CRATP43155 626 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 EMDP50402 254 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 GPR143P51810 404 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 MTPNP58546 118 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ZNHIT3Q15649 155 aaPredicted RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ZSCAN26Q16670 478 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 BROXQ5VW32 411 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 SAXO2Q658L1 398 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ZCCHC12Q6PEW1 402 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ARPINQ7Z6K5 226 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 DEFB107AQ8IZN7 70 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ZNF615Q8N8J6 731 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 OR8J3Q8NGG0 315 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 C16orf52Q8NHV5 167 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 M1APQ8TC57 530 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 THAP4Q8WY91 577 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 JADE3Q92613 823 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 C16orf58Q96GQ5 468 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ECSITQ9BQ95 431 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 C1orf21Q9H246 121 aa13.13□□□□□ -0.31
CCDC130-208ENST00000588071 PPIEQ9UNP9 301 aaKnown RBP13.13□□□□□ -0.31
CCDC130-208ENST00000588071 HEMK1Q9Y5R4 338 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms