RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 ACAP2Q15057 778 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 OR52E8Q6IFG1 317 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 METTL2BQ6P1Q9 378 aaKnown RBP13.19□□□□□ -0.3
SDF2-202ENST00000585428 NUP54Q7Z3B4 507 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 MYLK4Q86YV6 388 aaPredicted RBP13.19□□□□□ -0.3
SDF2-202ENST00000585428 KRTAP1-3Q8IUG1 177 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 GALNT12Q8IXK2 581 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 PPM1NQ8N819 430 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
SDF2-202ENST00000585428 OR1J4Q8NGS1 313 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 KCTD4Q8WVF5 259 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 HGDQ93099 445 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 C18orf12Q96KH6 178 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 GPR78Q96P69 363 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 CES1P1Q9UKY3 287 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 EXO1Q9UQ84 846 aaKnown RBP13.19□□□□□ -0.3
SDF2-202ENST00000585428 AKAP6Q13023 2319 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 NINQ8N4C6 2090 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 C2orf72A6NCS6 295 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 GNB5O14775 395 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 ICOSLGO75144 302 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 C2P06681 752 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 DRD2P14416 443 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 GPX3P22352 226 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 MASP1P48740 699 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 GNG11P61952 73 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 MAP4K2Q12851 820 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 SNTA1Q13424 505 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 GTF2H2Q13888 395 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 TOMM20Q15388 145 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 FBXW10Q5XX13 1052 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 DESI1Q6ICB0 168 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 SLC30A6Q6NXT4 461 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 GTF2H2CQ6P1K8 395 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 GOLGA7Q7Z5G4 137 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 YRDCQ86U90 279 aaKnown RBP13.18□□□□□ -0.3
SDF2-202ENST00000585428 NUDT13Q86X67 352 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 PRR22Q8IZ63 422 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 TRPC4APQ8TEL6 797 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 SLC44A1Q8WWI5 657 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 NXF5Q9H1B4 397 aaKnown RBP13.18□□□□□ -0.3
SDF2-202ENST00000585428 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 NEUROD4Q9HD90 331 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 ZNF639Q9UID6 485 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 DTX4Q9Y2E6 619 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 TNPO3Q9Y5L0 923 aaKnown RBP13.18□□□□□ -0.3
SDF2-202ENST00000585428 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
SDF2-202ENST00000585428 A0A087X1B8 175 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 EEF1E1-BLOC1S5C9J1V9 151 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 OR7A17O14581 309 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 EEF1E1O43324 174 aaKnown RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 PPM1BO75688 479 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 CBR3O75828 277 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 SEMA3DO95025 777 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 CLDN9O95484 217 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 KLK1P06870 262 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 CPMP14384 443 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 PORP16435 677 aaPredicted RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 IRF9Q00978 393 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 GUCY2DQ02846 1103 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 RCAN2Q14206 197 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 SLMAPQ14BN4 828 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 FAM83EQ2M2I3 478 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 PRICKLE4Q2TBC4 344 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 CXorf67Q86X51 503 aaPredicted RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 WNT2BQ93097 391 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 ISL2Q96A47 359 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 CTHRC1Q96CG8 243 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 NODALQ96S42 347 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 TUBA1CQ9BQE3 449 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 YIPF4Q9BSR8 244 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 G6PC3Q9BUM1 346 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 RBM24Q9BX46 236 aaKnown RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 ADAM29Q9UKF5 820 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
SDF2-202ENST00000585428 NAV3Q8IVL0 2385 aa13.17□□□□□ -0.3
SDF2-202ENST00000585428 SNPHO15079 494 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 RAD51CO43502 376 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 KLHL2O95198 593 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 SIX3O95343 332 aaPredicted RBP13.16□□□□□ -0.3
SDF2-202ENST00000585428 INHBBP09529 407 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 RHOXF2BP0C7M4 288 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 CYP4B1P13584 511 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 GFAPP14136 432 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 DRD5P21918 477 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 MAGEA4P43358 317 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 PIK3CGP48736 1102 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 GFRA1P56159 465 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 DCAF7P61962 342 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 NKX6-1P78426 367 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms