RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 MPIP34949 423 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 SPRED3Q2MJR0 410 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 ABHD17BQ5VST6 288 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 IL23RQ5VWK5 629 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 GALNT12Q8IXK2 581 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 LGI4Q8N135 537 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 NFAM1Q8NET5 270 aaPredicted RBP21.49■■□□□ 1.03
LSM7-203ENST00000585409 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.49■■□□□ 1.032e-19■■■■□ 20.3
LSM7-203ENST00000585409 EXOSC8Q96B26 276 aaKnown RBP21.49■■□□□ 1.03
LSM7-203ENST00000585409 TSSK3Q96PN8 268 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 BBS4Q96RK4 519 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 OR8D2Q9GZM6 311 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 REEP4Q9H6H4 257 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 SLC35C2Q9NQQ7 365 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 STMN3Q9NZ72 180 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 HEY2Q9UBP5 337 aa21.49■■□□□ 1.03
LSM7-203ENST00000585409 CDK2AP1O14519 115 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 SLC19A2O60779 497 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 TGDSO95455 350 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 JUNP05412 331 aaKnown RBP21.48■■□□□ 1.03
LSM7-203ENST00000585409 NT5EP21589 574 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 PMP22Q01453 160 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 SPATA19Q7Z5L4 167 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 LIX1Q8N485 282 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 NATD1Q8N6N6 113 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 ELP5Q8TE02 316 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 PTPMT1Q8WUK0 201 aaPredicted RBP21.48■■□□□ 1.03
LSM7-203ENST00000585409 NCLNQ969V3 563 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 PPCDCQ96CD2 204 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 FBXL20Q96IG2 436 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 C1orf50Q9BV19 199 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 TAS2R7Q9NYW3 318 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 USH1CQ9Y6N9 552 aa21.48■■□□□ 1.03
LSM7-203ENST00000585409 SETD2Q9BYW2 2564 aaPredicted RBP21.47■■□□□ 1.03
LSM7-203ENST00000585409 MYOCOSA0A1B0GUC4 107 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 A8MUI8 341 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 TBX19O60806 448 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 ZFAND5O76080 213 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 SLITRK5O94991 958 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 ATP1B1P05026 303 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 C3AR1Q16581 482 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 MEP1AQ16819 746 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 OGFOD2Q6N063 350 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 HSDL2Q6YN16 418 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 ACAD11Q709F0 780 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 OR5L2Q8NGL0 311 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 SLC2A12Q8TD20 617 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 PPWD1Q96BP3 646 aaKnown RBP21.47■■□□□ 1.03
LSM7-203ENST00000585409 CNPPD1Q9BV87 410 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 RYDENQ9NUL5 291 aaKnown RBP21.47■■□□□ 1.03
LSM7-203ENST00000585409 ATAD3AQ9NVI7 634 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 GIMAP2Q9UG22 337 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 ZNF835Q9Y2P0 537 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 PCDHGB6Q9Y5F9 930 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 GTF3C1Q12789 2109 aa21.47■■□□□ 1.03
LSM7-203ENST00000585409 TRBV11-1A0A0K0K1C0 115 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 SDHDO14521 159 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 PRPS1L1P21108 318 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 TACR1P25103 407 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 FEN1P39748 380 aaKnown RBP21.46■■□□□ 1.03
LSM7-203ENST00000585409 CASP6P55212 293 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 ZNF267Q14586 743 aaPredicted RBP21.46■■□□□ 1.03
LSM7-203ENST00000585409 NXNQ6DKJ4 435 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 H3F3CQ6NXT2 135 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 FAM47EQ6ZV65 393 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 MMP21Q8N119 569 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 OR8K3Q8NH51 312 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 ZFP28Q8NHY6 868 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 ACTRT2Q8TDY3 377 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 UCN3Q969E3 161 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 SENP5Q96HI0 755 aaPredicted RBP21.46■■□□□ 1.03
LSM7-203ENST00000585409 SIKE1Q9BRV8 207 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 SLCO1B3Q9NPD5 702 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 TINAGQ9UJW2 476 aa21.46■■□□□ 1.03
LSM7-203ENST00000585409 WASHC1A8K0Z3 465 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 FCHO1O14526 889 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 AKAP10O43572 662 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 BCAS2O75934 225 aaPredicted RBP21.45■■□□□ 1.02
LSM7-203ENST00000585409 SSTR2P30874 369 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 CDSNQ15517 529 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 TESK1Q15569 626 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 ZNF766Q5HY98 468 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 RNF111Q6ZNA4 994 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 Q6ZPB1 254 aaPredicted RBP21.45■■□□□ 1.02
LSM7-203ENST00000585409 LARP4Q71RC2 724 aaKnown RBP eCLIP21.45■■□□□ 1.021e-7■■■■■ 27.1
LSM7-203ENST00000585409 APCDD1LQ8NCL9 501 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 OR7G1Q8NGA0 311 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 CEP70Q8NHQ1 597 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 THAP3Q8WTV1 239 aaPredicted RBP21.45■■□□□ 1.02
LSM7-203ENST00000585409 ERP27Q96DN0 273 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 CNRIP1Q96F85 164 aaPredicted RBP21.45■■□□□ 1.02
LSM7-203ENST00000585409 EGLN2Q96KS0 407 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 BRINP2Q9C0B6 783 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 CXorf21Q9HAI6 301 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 SH3BP4Q9P0V3 963 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 BAIAP2L1Q9UHR4 511 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 CFL2Q9Y281 166 aa21.45■■□□□ 1.02
LSM7-203ENST00000585409 OR6C76A6NM76 312 aa21.44■■□□□ 1.02
LSM7-203ENST00000585409 C19orf84I3L1E1 186 aa21.44■■□□□ 1.02
LSM7-203ENST00000585409 PDPK1O15530 556 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms