RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
LIG3-203ENST00000585370 OR2T5Q6IEZ7 315 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 ZCCHC12Q6PEW1 402 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 PRSS42Q7Z5A4 293 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 KRT73Q86Y46 540 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 CLEC4FQ8N1N0 589 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 CA13Q8N1Q1 262 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 ARHGEF39Q8N4T4 335 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 HORMAD2Q8N7B1 307 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 FAM86B1Q8N7N1 296 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 FAM181AQ8N9Y4 354 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 TTC29Q8NA56 475 aaPredicted RBP9.76□□□□□ -0.85
LIG3-203ENST00000585370 OR2T29Q8NH02 315 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 NFKBIDQ8NI38 313 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 BBS10Q8TAM1 723 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 SUN3Q8TAQ9 357 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 KLHL6Q8WZ60 621 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 UCN3Q969E3 161 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 HSH2DQ96JZ2 352 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 TGM7Q96PF1 710 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 RBM4BQ9BQ04 359 aaKnown RBP9.76□□□□□ -0.85
LIG3-203ENST00000585370 RBM4Q9BWF3 364 aaKnown RBP9.76□□□□□ -0.85
LIG3-203ENST00000585370 CAAP1Q9H8G2 361 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 BCL2L10Q9HD36 194 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 USE1Q9NZ43 259 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 ACSL6Q9UKU0 697 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 NAALAD2Q9Y3Q0 740 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 TDRD6O60522 2096 aaKnown RBP9.76□□□□□ -0.85
LIG3-203ENST00000585370 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
LIG3-203ENST00000585370 A0A0G2JPF8 293 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 HYKKA2RU49 373 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 C7orf72A4D263 438 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 HNRNPCL2B2RXH8 293 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 HNRNPCL3B7ZW38 293 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 H0YIG0 161 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 HMGN4O00479 90 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 CLDN4O14493 209 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SOCS2O14508 198 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 PRAMEF10O60809 474 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 E2F6O75461 281 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 GCM2O75603 506 aaPredicted RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 PGM3O95394 542 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 HNRNPCL4P0DMR1 293 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 CPMP14384 443 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 ETS2P15036 469 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 FPR1P21462 350 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 DNAJA1P31689 397 aaKnown RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 GABRA4P48169 554 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 CHN2P52757 468 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 CRISP3P54108 245 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 ARSFP54793 590 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 KCNJ10P78508 379 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 KCNC4Q03721 635 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 C16orf72Q14CZ0 275 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 PDK3Q15120 406 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 NR0B2Q15466 257 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 NRF1Q16656 503 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 CLPPQ16740 277 aaPredicted RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 NHSL2Q5HYW2 709 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 ATAD3BQ5T9A4 648 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 HES3Q5TGS1 186 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SHQ1Q6PI26 577 aaKnown RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 FAM92BQ6ZTR7 304 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 MED25Q71SY5 747 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 STK32CQ86UX6 486 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 EPHX4Q8IUS5 362 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SLC35F3Q8IY50 421 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 LGI4Q8N135 537 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 DHRSXQ8N5I4 330 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 NUP43Q8NFH3 380 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 OR4C6Q8NH72 309 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 FAM110BQ8TC76 370 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SLC38A5Q8WUX1 472 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 XAGE5Q8WWM1 108 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 GEMIN6Q8WXD5 167 aaKnown RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 TFAP2CQ92754 450 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 PMM1Q92871 262 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 MAL2Q969L2 176 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 MVB12AQ96EY5 273 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 TPD52L3Q96J77 140 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 BTBD2Q9BX70 525 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 ACTRT3Q9BYD9 372 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 OR51I1Q9H343 314 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 TRIM45Q9H8W5 580 aaPredicted RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 THSD1Q9NS62 852 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 EXD2Q9NVH0 621 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SOHLH2Q9NX45 425 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SMPD3Q9NY59 655 aaPredicted RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 TRPC4Q9UBN4 977 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 SCOCQ9UIL1 159 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 CLCA2Q9UQC9 943 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 PCDHGB3Q9Y5G1 929 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 ORC6Q9Y5N6 252 aa9.75□□□□□ -0.85
LIG3-203ENST00000585370 MN1Q10571 1320 aaPredicted RBP9.75□□□□□ -0.85
LIG3-203ENST00000585370 SNRNP200O75643 2136 aaKnown RBP9.74□□□□□ -0.85
LIG3-203ENST00000585370 IGHV5-51A0A0C4DH38 117 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 ADAMDEC1O15204 470 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 B4GAT1O43505 415 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 CHST10O43529 356 aa9.74□□□□□ -0.85
LIG3-203ENST00000585370 SIGLEC6O43699 453 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms