RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 RAB11BQ15907 218 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 SHFQ7M4L6 423 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ZBTB20Q9HC78 741 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 BOLA2-SMG1P6H3BVE0 249 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 NR4A2P43354 598 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 CAMLGP49069 296 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 RAB4BP61018 213 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 APOFQ13790 326 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 KANK2Q63ZY3 851 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 GSG1LQ6UXU4 331 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 OR2B2Q9GZK3 357 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PDE7BQ9NP56 450 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PIRO00625 290 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 SEC14L5O43304 696 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 CHMP24386 653 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 RAB5BP61020 215 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 MARVELD2Q8N4S9 558 aa12.65□□□□□ -0.38
RAB11FIP4-210ENST00000585058 AKR1C2P52895 323 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 CEACAM7Q14002 265 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FAM69BQ5VUD6 431 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 LEG1Q6P5S2 330 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 C6orf89Q6UWU4 347 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 TEX26Q8N6G2 289 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OR4K13Q8NH42 304 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 HUS1BQ8NHY5 278 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 TXNRD2Q9NNW7 524 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 MARCH4Q9P2E8 410 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 B4GALT7Q9UBV7 327 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 GPR52Q9Y2T5 361 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 SCAMP2O15127 329 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RNGTTO60942 597 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 DNAJB5O75953 348 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 CD34P28906 385 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RNASE10Q5GAN6 216 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PLBD1Q6P4A8 553 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 NCDNQ9UBB6 729 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 IL20RAQ9UHF4 553 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 SOBPA7XYQ1 873 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FAM227AF5H4B4 570 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PRKYO43930 277 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OXSR1O95747 527 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RNH1P13489 461 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ETFAP13804 333 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 HRH2P25021 359 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PTH2RP49190 550 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PITX1P78337 314 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RSU1Q15404 277 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ZNF542PQ5EBM4 170 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 BCL2L15Q5TBC7 163 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OR4C11Q6IEV9 310 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OR8K5Q8NH50 307 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 TRIB3Q96RU7 358 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 KLHL21Q9UJP4 597 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 B3GALT1Q9Y5Z6 326 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OR8U9P0C7N5 309 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 THBS2P35442 1172 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 HTR2BP41595 481 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FOXK1P85037 733 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 NXPE4Q6UWF7 544 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 CDHR3Q6ZTQ4 885 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RCBTB1Q8NDN9 531 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 TRMT10AQ8TBZ6 339 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FUNDC2Q9BWH2 189 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PLEKHA3Q9HB20 300 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 CCDC163A0A0D9SF12 145 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 AMY2AP04746 511 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RHOP08100 348 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 AGTR1P30556 359 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PITPNBP48739 271 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 SNRPD2P62316 118 aaKnown RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ZNF423Q2M1K9 1284 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 BLOC1S3Q6QNY0 202 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ARHGAP12Q8IWW6 846 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 CLECL1Q8IZS7 167 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ZFAND2BQ8WV99 257 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 LMF1Q96S06 567 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 NAA11Q9BSU3 229 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 SMOXQ9NWM0 555 aa12.64□□□□□ -0.39
RAB11FIP4-210ENST00000585058 GOLGA4Q13439 2230 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 SLC1A7O00341 560 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PORP16435 677 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 HOXD13P35453 343 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RPS15AP62244 130 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OR4D1Q15615 310 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ZNF791Q3KP31 576 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 AWAT2Q6E213 333 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 ZNF783Q6ZMS7 281 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FTMTQ8N4E7 242 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 IL22RA1Q8N6P7 574 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 OR52B6Q8NGF0 335 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FEVQ99581 238 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 CACNG6Q9BXT2 260 aa12.63□□□□□ -0.39
RAB11FIP4-210ENST00000585058 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms