RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 NUDT8Q8WV74 236 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 N4BP2L2Q92802 583 aaPredicted RBP16.7■□□□□ 0.26
SNX11-212ENST00000583320 CCDC115Q96NT0 180 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 SPAG4Q9NPE6 437 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 SERHLQ9NQF3 203 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 SH3BP4Q9P0V3 963 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 ABCD2Q9UBJ2 740 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 AP3M1Q9Y2T2 418 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 PCDHA9Q9Y5H5 950 aa16.7■□□□□ 0.26
SNX11-212ENST00000583320 SLC6A2P23975 617 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 HTR1EP28566 365 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 TDGF1P3P51864 188 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 DEFB134Q4QY38 66 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 RIPOR1Q6ZS17 1223 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 ULK2Q8IYT8 1036 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 TTC29Q8NA56 475 aaPredicted RBP16.69■□□□□ 0.26
SNX11-212ENST00000583320 CDRT15Q96T59 188 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 CGREF1Q99674 301 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 SH3GL1Q99961 368 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 ANKHQ9HCJ1 492 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 ATP13A2Q9NQ11 1180 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 TMEM181Q9P2C4 612 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 SERTAD3Q9UJW9 196 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 FBXL4Q9UKA2 621 aa16.69■□□□□ 0.26
SNX11-212ENST00000583320 TRBV5-3A0A0A0MS03 114 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 A0A1W2PR48 441 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 HYKKA2RU49 373 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 PROM1O43490 865 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 JRKO75564 520 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 IGHEP01854 428 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 ZCCHC18P0CG32 403 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 COX6B1P14854 86 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 FRKP42685 505 aaPredicted RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 ZNF630Q2M218 657 aaPredicted RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 MUM1Q2TAK8 710 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 FAM214AQ32MH5 1076 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 ZNF385BQ569K4 471 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 PIGGQ5H8A4 983 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 SAMD4BQ5PRF9 694 aaKnown RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 C6orf10Q5SRN2 563 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 NDUFAF5Q5TEU4 345 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 MRPL14Q6P1L8 145 aaKnown RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 TLDC1Q6P9B6 456 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 FBXW8Q8N3Y1 598 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 OR8J3Q8NGG0 315 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 GOT1L1Q8NHS2 421 aaPredicted RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 CCDC120Q96HB5 630 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 SPRTNQ9H040 489 aaPredicted RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 PAIP1Q9H074 479 aaKnown RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 SLC22A11Q9NSA0 550 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 OLAHQ9NV23 265 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 TEX10Q9NXF1 929 aaPredicted RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 KCMF1Q9P0J7 381 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 DHCR7Q9UBM7 475 aaKnown RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 GPN3Q9UHW5 284 aaPredicted RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 DAPP1Q9UN19 280 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 MRPS2Q9Y399 296 aaKnown RBP16.68■□□□□ 0.26
SNX11-212ENST00000583320 GMEB1Q9Y692 573 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 SPACA6W5XKT8 324 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 SCN3AQ9NY46 2000 aa16.68■□□□□ 0.26
SNX11-212ENST00000583320 H0YHG0 523 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 RFXANKO14593 260 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 DNAJA2O60884 412 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 NSA2O95478 260 aaKnown RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 HOXB9P17482 250 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 PTPN6P29350 595 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 TLX1P31314 330 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 BUD31P41223 144 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 EEFSECP57772 596 aaKnown RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 TNFRSF17Q02223 184 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 AIMP2Q13155 320 aaKnown RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 RUNX2Q13950 521 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 MLC1Q15049 377 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 B3GNTL1Q67FW5 361 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 ZNF324BQ6AW86 544 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 ANKRD26P1Q6NSI1 321 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 FAM180AQ6UWF9 173 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 SPNS3Q6ZMD2 512 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 SLC15A3Q8IY34 581 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 CATSPER1Q8NEC5 780 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 ADAMTS18Q8TE60 1221 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 MVB12AQ96EY5 273 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 C10orf90Q96M02 699 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 ANKRD27Q96NW4 1050 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 MAPKAP1Q9BPZ7 522 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 IL1RL2Q9HB29 575 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 ACSS1Q9NUB1 689 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 IFT80Q9P2H3 777 aaPredicted RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 FBXW2Q9UKT8 454 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 PSME2Q9UL46 239 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 PCDHGB4Q9UN71 923 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
SNX11-212ENST00000583320 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.67■□□□□ 0.26
SNX11-212ENST00000583320 ABCA2Q9BZC7 2435 aa16.66■□□□□ 0.26
SNX11-212ENST00000583320 H0YIG0 161 aa16.66■□□□□ 0.26
SNX11-212ENST00000583320 PCDH17O14917 1159 aa16.66■□□□□ 0.26
SNX11-212ENST00000583320 CIB2O75838 187 aa16.66■□□□□ 0.26
SNX11-212ENST00000583320 OR2B3O76000 313 aa16.66■□□□□ 0.26
SNX11-212ENST00000583320 AIFM1O95831 613 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms