RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 WDR25Q64LD2 544 aaPredicted RBP2.72□□□□□ -1.97
COPS3-217ENST00000583160 CAPN13Q6MZZ7 669 aaPredicted RBP2.72□□□□□ -1.97
COPS3-217ENST00000583160 CASC4Q6P4E1 433 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 ZNF530Q6P9A1 599 aaPredicted RBP2.72□□□□□ -1.97
COPS3-217ENST00000583160 MON2Q7Z3U7 1717 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 SLFN11Q7Z7L1 901 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 ARL14Q8N4G2 192 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 CCDC197Q8NCU1 140 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 ZNF671Q8TAW3 534 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 VN1R17PQ8TDU5 208 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 PCED1BQ96HM7 432 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 RAB40CQ96S21 281 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 TTYH2Q9BSA4 534 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 WWP1Q9H0M0 922 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 IL1RL2Q9HB29 575 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 PLEK2Q9NYT0 353 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 NFKBIL1Q9UBC1 381 aaPredicted RBP2.72□□□□□ -1.97
COPS3-217ENST00000583160 OR1A2Q9Y585 309 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 PIK3C2AO00443 1686 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 QRICH2Q9H0J4 1663 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 NFAT5O94916 1531 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 KIAA0232Q92628 1395 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 MAP3K5Q99683 1374 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 NINLQ9Y2I6 1382 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 RGPD5Q99666 1765 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 PAPPAQ13219 1627 aa2.71□□□□□ -1.97
COPS3-217ENST00000583160 LRRK1Q38SD2 2015 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 TTC21AQ8NDW8 1320 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 OVOS2A0A0G2JMS6 1433 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 OVOS2A0A0J9YW53 1432 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 OVOS2Q6IE36 1432 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 SYT7O43581 403 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 PRAMEF12O95522 483 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 GLRA1P23415 457 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 PRKAR2BP31323 418 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 SOAT1P35610 550 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 CCR4P51679 360 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 NDST1P52848 882 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 SLC3A1Q07837 685 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 MFGE8Q08431 387 aaPredicted RBP2.71□□□□□ -1.98
COPS3-217ENST00000583160 TRAT1Q6PIZ9 186 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 SIGLEC15Q6ZMC9 328 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 FBXO16Q8IX29 292 aaPredicted RBP2.71□□□□□ -1.98
COPS3-217ENST00000583160 OR8H2Q8N162 312 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 ICA1LQ8NDH6 482 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 LINC01006Q8NI28 216 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 MRPL24Q96A35 216 aaKnown RBP2.71□□□□□ -1.98
COPS3-217ENST00000583160 MAGEB18Q96M61 343 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 RASL10BQ96S79 203 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 SLCO1C1Q9NYB5 712 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 SPG21Q9NZD8 308 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 EIF3KQ9UBQ5 218 aaKnown RBP2.71□□□□□ -1.98
COPS3-217ENST00000583160 MLXQ9UH92 298 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 ABCG2Q9UNQ0 655 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 GPR132Q9UNW8 380 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 NHSQ6T4R5 1651 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 FAM208AQ9UK61 1670 aaKnown RBP2.71□□□□□ -1.98
COPS3-217ENST00000583160 PLEKHG2Q9H7P9 1386 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 UTRNP46939 3433 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 CD163L1Q9NR16 1453 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 LY75O60449 1722 aa2.71□□□□□ -1.98
COPS3-217ENST00000583160 CENPJQ9HC77 1338 aaPredicted RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 PPIP5K1Q6PFW1 1433 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 ATP6AP2A0A1C7CYW4 349 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 YDJCA8MPS7 323 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 ST8SIA3O43173 380 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 GPAA1O43292 621 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 EZRP15311 586 aaKnown RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 CALML3P27482 149 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 CCND3P30281 292 aaPredicted RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 OR1D2P34982 312 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 AKAP17AQ02040 695 aaKnown RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 PRKCEQ02156 737 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 TGIF1Q15583 401 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 SNRNP48Q6IEG0 339 aaKnown RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 ZNF544Q6NX49 715 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 IGFL3Q6UXB1 125 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 GCNT7Q6ZNI0 430 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 CYP4V2Q6ZWL3 525 aaPredicted RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 ADGRD2Q7Z7M1 963 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 CHDHQ8NE62 594 aaPredicted RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 OR4F5Q8NH21 305 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 GANCQ8TET4 914 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 UBLCP1Q8WVY7 318 aaPredicted RBP2.7□□□□□ -1.98
COPS3-217ENST00000583160 FAF2Q96CS3 445 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 TAS2R16Q9NYV7 291 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 CCDC7Q96M83 1385 aa2.7□□□□□ -1.98
COPS3-217ENST00000583160 TTC21BQ7Z4L5 1316 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 EVC2Q86UK5 1308 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 LTN1O94822 1766 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 TNS2Q63HR2 1409 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 SHANK3Q9BYB0 1731 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 IGHV3-35A0A0C4DH35 117 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 TMEM129A0AVI4 362 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 MAGEB16A2A368 324 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 EPOPA6NHQ4 379 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 ANXA9O76027 345 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 APBB3O95704 486 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 APOA4P06727 396 aa2.69□□□□□ -1.98
COPS3-217ENST00000583160 PROS1P07225 676 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms