RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OR9A2Q8NGT5 310 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 CNIH3Q8TBE1 160 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 C10orf90Q96M02 699 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 NODALQ96S42 347 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 CCDC3Q9BQI4 270 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 LRRC61Q9BV99 259 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 CCNB1IP1Q9NPC3 277 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 SLC9A8Q9Y2E8 581 aa21.3■■□□□ 1
CCDC47-204ENST00000582252 DUXAA6NLW8 204 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 B4DGG1 531 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 OXSR1O95747 527 aaPredicted RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 ALPPL2P10696 532 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 AGXTP21549 392 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 MC3RP41968 323 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 DUSP2Q05923 314 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 GANABQ14697 944 aaKnown RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 MAD2L1BPQ15013 274 aaPredicted RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 PROX2Q3B8N5 592 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 PMS2CLQ68D20 193 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 FRMPD2BQ6IN97 320 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 GKN2Q86XP6 184 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 ERI1Q8IV48 349 aaKnown RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 SPARTQ8N0X7 666 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 ALPK1Q96QP1 1244 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 ACTRT3Q9BYD9 372 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 SEMA6CQ9H3T2 930 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 FANCEQ9HB96 536 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 EVA1BQ9NVM1 165 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 TMEM9Q9P0T7 183 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 SLC22A7Q9Y694 548 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 CASC3O15234 703 aaKnown RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 BCAT2O15382 392 aaPredicted RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 RECKO95980 971 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 EIF2S1P05198 315 aaKnown RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 XKP51811 444 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 AFF3P51826 1226 aaKnown RBP21.29■■□□□ 1
CCDC47-204ENST00000582252 GPAT3Q53EU6 434 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 LYSMD4Q5XG99 296 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 LAIR2Q6ISS4 152 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 DEPDC4Q8N2C3 294 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 KLHL6Q8WZ60 621 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 ISOC1Q96CN7 298 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 MS4A4EQ96PG1 132 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 OR7D2Q96RA2 312 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 KLHL25Q9H0H3 589 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 POMT2Q9UKY4 750 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 NAALAD2Q9Y3Q0 740 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 CCDC88CQ9P219 2028 aa21.29■■□□□ 1
CCDC47-204ENST00000582252 LOC105369274A0A096LPK9 316 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 LOC102723532A0A0G2JNH3 316 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 PRAMEF27A3QJZ7 478 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 TRMUO75648 421 aaKnown RBP21.28■■□□□ 1
CCDC47-204ENST00000582252 CSF2P04141 144 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 PVRP15151 417 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 DCKP27707 260 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 GGT2P36268 569 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 LSSP48449 732 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 DYNC1I2Q13409 638 aaKnown RBP21.28■■□□□ 1
CCDC47-204ENST00000582252 RUNX2Q13950 521 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 USP53Q70EK8 1073 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 OR4N4Q8N0Y3 316 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 PARP8Q8N3A8 854 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 CSNK1A1LQ8N752 337 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 PINK1Q9BXM7 581 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 NTMQ9P121 344 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 PTGFRNQ9P2B2 879 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 DOLKQ9UPQ8 538 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 CABIN1Q9Y6J0 2220 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 USP34Q70CQ2 3546 aa21.28■■□□□ 1
CCDC47-204ENST00000582252 SLITRK5O94991 958 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 CNR2P34972 360 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 ZNF528Q3MIS6 628 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 B3GNT8Q7Z7M8 397 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 OR13F1Q8NGS4 319 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 IPCEF1Q8WWN9 437 aaPredicted RBP21.27■■□□□ 1
CCDC47-204ENST00000582252 DHRS1Q96LJ7 313 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 YIPF4Q9BSR8 244 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 UCK1Q9HA47 277 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 KMT2EQ8IZD2 1858 aa21.27■■□□□ 1
CCDC47-204ENST00000582252 FAAHO00519 579 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 PCDH17O14917 1159 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 H1F0P07305 194 aaKnown RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 CHRM4P08173 479 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 NME1P15531 152 aaKnown RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 PORP16435 677 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 CBLP22681 906 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 SLC5A2P31639 672 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 DHPSP49366 369 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 NXPH1P58417 271 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 HPCAP84074 193 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 TEKQ02763 1124 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 DCST1Q5T197 706 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 DEF8Q6ZN54 512 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 DGLUCYQ7Z3D6 616 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 P3H2Q8IVL5 708 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 OR9Q2Q8NGE9 314 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 ADAMTS15Q8TE58 950 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 NR4A3Q92570 626 aa21.26■□□□□ 0.99
CCDC47-204ENST00000582252 TRNT1Q96Q11 434 aaKnown RBP21.26■□□□□ 0.99
CCDC47-204ENST00000582252 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms