RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	C8orf74	Q6P047	294 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PLXDC2	Q6UX71	529 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ANGPTL8	Q6UXH0	198 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	COMMD6	Q7Z4G1	85 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MILR1	Q7Z6M3	343 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	YRDC	Q86U90	279 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	LACC1	Q8IV20	430 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	VWA5B2	Q8N398	1253 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	OR4F6	Q8NGB9	312 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	UHMK1	Q8TAS1	419 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	RMND5B	Q96G75	393 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	HBEGF	Q99075	208 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	LRRC1	Q9BTT6	524 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ITPA	Q9BY32	194 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	UGT2B28	Q9BY64	529 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	UBQLN3	Q9H347	655 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	RASSF1	Q9NS23	344 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PSD3	Q9NYI0	1048 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ST6GALNAC2	Q9UJ37	374 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CBLC	Q9ULV8	474 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MAPRE3	Q9UPY8	281 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	EXPH5	Q8NEV8	1989 aa		10.63	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MED12	Q93074	2177 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CCDC189	A1A4V9	331 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114		A6NNC1	897 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SMIM24	O75264	130 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NME6	O75414	186 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PDYN	P01213	254 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	HPN	P05981	417 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ABCB1	P08183	1280 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	INHBA	P08476	426 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	RBP1	P09455	135 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CD99	P14209	185 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	S1PR1	P21453	382 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CNTF	P26441	200 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	DEK	P35659	375 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ALDH9A1	P49189	494 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CDH13	P55290	713 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ETF1	P62495	437 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	RPP38	P78345	283 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SRY	Q05066	204 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FLYWCH1	Q4VC44	716 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	LETMD1	Q6P1Q0	360 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	POMZP3	Q6PJE2	187 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PAGE2	Q7Z2X7	111 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	CDC20B	Q86Y33	519 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PM20D2	Q8IYS1	436 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	METTL4	Q8N3J2	472 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	OR7G1	Q8NGA0	311 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	OR1J4	Q8NGS1	313 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	LINC01560	Q8TB33	94 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	RDH11	Q8TC12	318 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SLC44A1	Q8WWI5	657 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	RNASE6	Q93091	150 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ABTB1	Q969K4	478 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	KLHL29	Q96CT2	875 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	OMA1	Q96E52	524 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	HSPBAP1	Q96EW2	488 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	WDYHV1	Q96HA8	205 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NODAL	Q96S42	347 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NTMT1	Q9BV86	223 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PRDM14	Q9GZV8	571 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ELOVL6	Q9H5J4	265 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ACSS3	Q9H6R3	686 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ANKRA2	Q9H9E1	313 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	AHSP	Q9NZD4	102 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MAT2B	Q9NZL9	334 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MTRF1L	Q9UGC7	380 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ADAM29	Q9UKF5	820 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PLLP	Q9Y342	182 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PCDHGB3	Q9Y5G1	929 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PCDHA9	Q9Y5H5	950 aa		10.62	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	POC1B-GALNT4	F8VUJ3	575 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	STX16-NPEPL1	H3BU86	382 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	STX16	O14662	325 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PPM1B	O75688	479 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PCSK2	P16519	638 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TCEA1	P23193	301 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PTPN6	P29350	595 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TIMP3	P35625	211 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SOX18	P35713	384 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NAGLU	P54802	743 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MRPS35	P82673	323 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PLCXD2	Q0VAA5	305 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	MGAT2	Q10469	447 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	GALNT1	Q10472	559 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	PRICKLE4	Q2TBC4	344 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TRMT12	Q53H54	448 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TCHHL1	Q5QJ38	904 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TEX35	Q5T0J7	233 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	NSUN5P2	Q63ZY6	315 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TIGD3	Q6B0B8	471 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	VASN	Q6EMK4	673 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	SLC48A1	Q6P1K1	146 aa		10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	METTL2B	Q6P1Q9	378 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	ZNF572	Q7Z3I7	529 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-223	ENST00000582114	TGIF2LY	Q8IUE0	185 aa		10.61	□□□□□ -0.71

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