RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 EXO1Q9UQ84 846 aaKnown RBP11.55□□□□□ -0.56
SS18-219ENST00000581570 A0A087X1B8 175 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 FAM95CA0A1B0GW59 222 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 GLOD5A6NK44 160 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 C16orf97H3BN30 126 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 CCNT2O60583 730 aaKnown RBP11.54□□□□□ -0.56
SS18-219ENST00000581570 TMCC2O75069 709 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 ICOSLGO75144 302 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 CBR3O75828 277 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 F12P00748 615 aaPredicted RBP11.54□□□□□ -0.56
SS18-219ENST00000581570 SLC35E2BP0CK96 405 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 SLC35E2P0CK97 266 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 EPORP19235 508 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 ABCD3P28288 659 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 CCKARP32238 428 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 KCNJ5P48544 419 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 LHX2P50458 406 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 RAP1GDS1P52306 607 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 CLEC12BQ2HXU8 276 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 C10orf62Q5T681 223 aaPredicted RBP11.54□□□□□ -0.56
SS18-219ENST00000581570 SULT1C3Q6IMI6 304 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 MED27Q6P2C8 311 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 TRMT10BQ6PF06 316 aaKnown RBP11.54□□□□□ -0.56
SS18-219ENST00000581570 BTLAQ7Z6A9 289 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 IFNEQ86WN2 208 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 GPSM1Q86YR5 675 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 LAS2Q8IYD9 372 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 ZCCHC7Q8N3Z6 543 aaKnown RBP11.54□□□□□ -0.56
SS18-219ENST00000581570 RGMAQ96B86 450 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 CFAP36Q96G28 342 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 OSBPL11Q9BXB4 747 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 OPN3Q9H1Y3 402 aaPredicted RBP11.54□□□□□ -0.56
SS18-219ENST00000581570 OR10A5Q9H207 317 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 CXorf21Q9HAI6 301 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 PLAC1Q9HBJ0 212 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 ADGRE2Q9UHX3 823 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 RNF112Q9ULX5 631 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 DLGAP4Q9Y2H0 992 aa11.54□□□□□ -0.56
SS18-219ENST00000581570 HCRTR2O43614 444 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 TLX2O43763 284 aaPredicted RBP11.53□□□□□ -0.56
SS18-219ENST00000581570 PPM1BO75688 479 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 RHOXF2BP0C7M4 288 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 NAGAP17050 411 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 SERPINB1P30740 379 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 PTGDSP41222 190 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 GFRA1P56159 465 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 VEZF1Q14119 521 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 CDKL4Q5MAI5 379 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 HP1BP3Q5SSJ5 553 aaPredicted RBP11.53□□□□□ -0.56
SS18-219ENST00000581570 ANKRD34AQ69YU3 496 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 DESI1Q6ICB0 168 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 OR2A2Q6IF42 318 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 TMEM81Q6P7N7 255 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 AAGABQ6PD74 315 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 ZNF704Q6ZNC4 412 aaPredicted RBP11.53□□□□□ -0.56
SS18-219ENST00000581570 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 CHMP1BQ7LBR1 199 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 NUP54Q7Z3B4 507 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
SS18-219ENST00000581570 GALNT12Q8IXK2 581 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 SPATA6LQ8N4H0 392 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 ZNF615Q8N8J6 731 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 C17orf47Q8NEP4 570 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 OR7G3Q8NG95 312 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 NODALQ96S42 347 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 CENPKQ9BS16 269 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 REG4Q9BYZ8 158 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 DERL2Q9GZP9 239 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 WDR41Q9HAD4 459 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 GALNT9Q9HCQ5 603 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 TAS2R10Q9NYW0 307 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 PTBP2Q9UKA9 531 aaKnown RBP11.53□□□□□ -0.56
SS18-219ENST00000581570 ASB4Q9Y574 426 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 PSAT1Q9Y617 370 aa11.53□□□□□ -0.56
SS18-219ENST00000581570 DSCAMO60469 2012 aa11.52□□□□□ -0.56
SS18-219ENST00000581570 A0A1W2PR48 441 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 LRRC14BA6NHZ5 514 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 PLPP1O14494 284 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 PHF1O43189 567 aaPredicted RBP11.52□□□□□ -0.57
SS18-219ENST00000581570 CD5LO43866 347 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 CT62P0C5K7 136 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 NR2F6P10588 404 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 ZNF708P17019 499 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 KIR2DL2P43627 348 aaPredicted RBP11.52□□□□□ -0.57
SS18-219ENST00000581570 CLDN18P56856 261 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 SIRPAP78324 504 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 SNTA1Q13424 505 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 DDX39BQ13838 428 aaKnown RBP11.52□□□□□ -0.57
SS18-219ENST00000581570 E2F2Q14209 437 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 CYP1B1Q16678 543 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 MRM1Q6IN84 353 aaKnown RBP11.52□□□□□ -0.57
SS18-219ENST00000581570 SH2D5Q6ZV89 423 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 RNF175Q8N4F7 328 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 WDSUB1Q8N9V3 476 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 HGDQ93099 445 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 ZNF845Q96IR2 970 aaPredicted RBP11.52□□□□□ -0.57
SS18-219ENST00000581570 SFXN2Q96NB2 322 aa11.52□□□□□ -0.57
SS18-219ENST00000581570 NXF5Q9H1B4 397 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms