RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PYROXD2Q8N2H3 581 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 MLKLQ8NB16 471 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 ATG10Q9H0Y0 220 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 RNF41Q9H4P4 317 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 FAM124BQ9H5Z6 455 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 TMEM231Q9H6L2 316 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 SOHLH2Q9NX45 425 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC9A8Q9Y2E8 581 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 STYXL1Q9Y6J8 313 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 UBE4BO95155 1302 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 FAM205AQ6ZU69 1335 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 IGHV3-16A0A0C4DH30 117 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 ACOD1A6NK06 481 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 RASGRF2O14827 1237 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 MT-ND1P03886 318 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 SHC1P29353 583 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 MATKP42679 507 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 CSRP3P50461 194 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC7A2P52569 658 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 CCL14Q16627 93 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 SHROOM1Q2M3G4 852 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 ANKRD55Q3KP44 614 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 ARMCX5Q6P1M9 558 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 REG3GQ6UW15 175 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 FAM159AQ6UWV7 190 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 DPY19L2P2Q6ZN68 376 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 CNNM3Q8NE01 707 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 C17orf47Q8NEP4 570 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 U2AF1L4Q8WU68 220 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 NDUFAF3Q9BU61 184 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 RBM24Q9BX46 236 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 RAB17Q9H0T7 212 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 ADGRL4Q9HBW9 690 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC7A10Q9NS82 523 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 CLCA3PQ9Y6N3 262 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 GON4LQ3T8J9 2241 aa3.74□□□□□ -1.81
SMCHD1-205ENST00000581383 A0A0A6YYD4 124 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 A0A0J9YVX5 310 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 A0A1B0GTH9 108 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 BICDL2A1A5D9 508 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 CYB561D2O14569 222 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 EI24O14681 340 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 GALR3O60755 368 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 GSTA1P08263 222 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 HSD17B1P14061 328 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 UCP1P25874 307 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 PTPN4P29074 926 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 PPP2R1BP30154 601 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 PRDX2P32119 198 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 MAGEA4P43358 317 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 GMFBP60983 142 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 GABPB1Q06547 395 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 COX10Q12887 443 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 CEBPEQ15744 281 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 LEMD1Q68G75 181 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 REP15Q6BDI9 236 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 IRGCQ6NXR0 463 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 RFWD3Q6PCD5 774 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 OLFM4Q6UX06 510 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 APOOLQ6UXV4 268 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 RBM43Q6ZSC3 357 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC25A42Q86VD7 318 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 AMZ2Q86W34 360 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 ZNF491Q8N8L2 437 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 OR56B1Q8NGI3 324 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 FCGR1BQ92637 280 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 MRPL38Q96DV4 380 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 CPXM1Q96SM3 734 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 ST6GALNAC5Q9BVH7 336 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 TRIM6Q9C030 488 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 ALG9Q9H6U8 611 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 NGBQ9NPG2 151 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 ZNF446Q9NWS9 450 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 RCOR3Q9P2K3 495 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 EMCNQ9ULC0 261 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 KLF2Q9Y5W3 355 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 SYNJ2O15056 1496 aa3.73□□□□□ -1.81
SMCHD1-205ENST00000581383 RANBP6O60518 1105 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 IGHG3P01860 377 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 HOXD4P09016 255 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 ACADSP16219 412 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 CHRNA3P32297 505 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 CAMLGP49069 296 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 SGSHP51688 502 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 SPP2Q13103 211 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 SNX1Q13596 522 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 CYLC2Q14093 348 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 PDIA5Q14554 519 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 PCK2Q16822 640 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 ZNF699Q32M78 642 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 FAM219BQ5XKK7 198 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 RAET1GQ6H3X3 334 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 ABRAXAS1Q6UWZ7 409 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 MOB2Q70IA6 237 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 TMUB2Q71RG4 321 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 GOLGA7Q7Z5G4 137 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 GPBP1Q86WP2 473 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 LRRC49Q8IUZ0 686 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 RNF148Q8N7C7 305 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 CSNK1G2-AS1Q8NCQ2 148 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms