RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 MORN4Q8NDC4 146 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 OR7G2Q8NG99 324 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 FBXL20Q96IG2 436 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 SLC46A1Q96NT5 459 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 STACQ99469 402 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 GPR87Q9BY21 358 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 NRSN2Q9GZP1 204 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 A4GALTQ9NPC4 353 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 PRODH2Q9UF12 536 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 PPIEQ9UNP9 301 aaKnown RBP14.27□□□□□ -0.13
SS18-215ENST00000580642 CLCA3PQ9Y6N3 262 aa14.27□□□□□ -0.13
SS18-215ENST00000580642 SEC16AO15027 2179 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 A0A1W2PQ72 361 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 A0A1W2PS29 197 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 BRINP1O60477 761 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 TNFSF15O95150 251 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 AK1P00568 194 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 GUSBP08236 651 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 TNNI3P19429 210 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 GGT1P19440 569 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 S1PR1P21453 382 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 RBMS1P29558 406 aaKnown RBP14.26□□□□□ -0.13
SS18-215ENST00000580642 SLC5A2P31639 672 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 PCGF2P35227 344 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 RIPK1Q13546 671 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 ADRM1Q16186 407 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 C3orf38Q5JPI3 329 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
SS18-215ENST00000580642 MLIPQ5VWP3 458 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 MFSD12Q6NUT3 480 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 TMEM151BQ8IW70 566 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 ZZZ3Q8IYH5 903 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 EID3Q8N140 333 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 RNF148Q8N7C7 305 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 GALNT6Q8NCL4 622 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 ADCY4Q8NFM4 1077 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 OR2Y1Q8NGV0 311 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 OR5AK3PQ8NH89 298 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 PTPMT1Q8WUK0 201 aaPredicted RBP14.26□□□□□ -0.13
SS18-215ENST00000580642 KAT2AQ92830 837 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 PMM1Q92871 262 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 CCDC124Q96CT7 223 aaKnown RBP14.26□□□□□ -0.13
SS18-215ENST00000580642 GIMAP5Q96F15 307 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 VPS50Q96JG6 964 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 LRGUKQ96M69 825 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 CRB3Q9BUF7 120 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 DENND2DQ9H6A0 471 aaPredicted RBP14.26□□□□□ -0.13
SS18-215ENST00000580642 DUSP22Q9NRW4 184 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 CALML5Q9NZT1 146 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 C3orf18Q9UK00 162 aa14.26□□□□□ -0.13
SS18-215ENST00000580642 LOC102723996A0A087X1L8 192 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 OR6C76A6NM76 312 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 C17orf105B2RV13 164 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 STMND1H3BQB6 276 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 GSTA4O15217 222 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 CBX7O95931 251 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 IFNA14P01570 189 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 ARAFP10398 606 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 TCN1P20061 433 aaPredicted RBP14.25□□□□□ -0.13
SS18-215ENST00000580642 SOX18P35713 384 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 MAP3K8P41279 467 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 MAN2A2P49641 1150 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 ELF3P78545 371 aaPredicted RBP14.25□□□□□ -0.13
SS18-215ENST00000580642 MS4A2Q01362 244 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 ZNHIT3Q15649 155 aaPredicted RBP14.25□□□□□ -0.13
SS18-215ENST00000580642 TRMT12Q53H54 448 aaKnown RBP14.25□□□□□ -0.13
SS18-215ENST00000580642 ATAD3BQ5T9A4 648 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 IRAK1BP1Q5VVH5 260 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 AP1ARQ63HQ0 302 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 AAGABQ6PD74 315 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 CCDC80Q76M96 950 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 LAPTM4BQ86VI4 370 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 IFNEQ86WN2 208 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 PTOV1Q86YD1 416 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 NLGN4XQ8N0W4 816 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 SHISA5Q8N114 240 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 NLGN4YQ8NFZ3 816 aaPredicted RBP14.25□□□□□ -0.13
SS18-215ENST00000580642 PMEPA1Q969W9 287 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 PPWD1Q96BP3 646 aaKnown RBP14.25□□□□□ -0.13
SS18-215ENST00000580642 RNF145Q96MT1 663 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 PIGUQ9H490 435 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 EXD2Q9NVH0 621 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 P2RX2Q9UBL9 471 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 WDR87Q6ZQQ6 2873 aa14.25□□□□□ -0.13
SS18-215ENST00000580642 CDRT15L2A8MXV6 281 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 AGRPO00253 132 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 HMGN4O00479 90 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 CXCR6O00574 342 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 ARPC2O15144 300 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 FKBP6O75344 327 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 KLF7O75840 302 aaPredicted RBP14.24□□□□□ -0.13
SS18-215ENST00000580642 PDE9AO76083 593 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 IGKV3-11P04433 115 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 TFPTP0C1Z6 253 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 UMPSP11172 480 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 ETFAP13804 333 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 PRKAG1P54619 331 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 POLE2P56282 527 aa14.24□□□□□ -0.13
SS18-215ENST00000580642 OR4D2P58180 307 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms