RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SERPINA7P05543 415 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 EFNA1P20827 205 aaPredicted RBP13.3□□□□□ -0.28
SKA2-205ENST00000580541 SOAT1P35610 550 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 MC3RP41968 323 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 PRKAG1P54619 331 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 TLE3Q04726 772 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 DUSP2Q05923 314 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 VAC14Q08AM6 782 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 MGAT2Q10469 447 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 NFYCQ13952 458 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 MYBPC3Q14896 1274 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 LTB4RQ15722 352 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 TRMT12Q53H54 448 aaKnown RBP13.3□□□□□ -0.28
SKA2-205ENST00000580541 SLC2A7Q6PXP3 512 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 FAM111BQ6SJ93 734 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 SZRD1Q7Z422 152 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 NFAM1Q8NET5 270 aaPredicted RBP13.3□□□□□ -0.28
SKA2-205ENST00000580541 ZNF721Q8TF20 911 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 NCLNQ969V3 563 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 MAGED4Q96JG8 741 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 AP3M1Q9Y2T2 418 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 NCOR2Q9Y618 2525 aa13.3□□□□□ -0.28
SKA2-205ENST00000580541 K7ENP7 123 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 UPK1AO00322 258 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 EBAG9O00559 213 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 CDK2AP1O14519 115 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 AIM2O14862 343 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 ATP5HO75947 161 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 AGR2O95994 175 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 IGKV3-11P04433 115 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 CT62P0C5K7 136 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 S1PR1P21453 382 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 CALB2P22676 271 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 RASSF2P50749 326 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 GPR143P51810 404 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 SLC37A1P57057 533 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 MRPS35P82673 323 aaKnown RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 GABPB1Q06547 395 aaPredicted RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 LRIF1Q5T3J3 769 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 INO80CQ6PI98 192 aaPredicted RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 C6orf120Q7Z4R8 191 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 SLC5A8Q8N695 610 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 CDRT4Q8N9R6 151 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 OR7G2Q8NG99 324 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 OR52R1Q8NGF1 315 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 FAM120BQ96EK7 910 aaKnown RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 MS4A4EQ96PG1 132 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 HOPXQ9BPY8 73 aaPredicted RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 SLC35A5Q9BS91 424 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 INPP5KQ9BT40 448 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 CXorf36Q9H7Y0 433 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
SKA2-205ENST00000580541 THUMPD1Q9NXG2 353 aaKnown RBP13.29□□□□□ -0.28
SKA2-205ENST00000580541 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 RNF103-CHMP3A0A140T963 221 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 C2orf92A0A1B0GVN3 265 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 HNRNPCL1O60812 293 aaKnown RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 ITGA3P26006 1051 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 SSTR4P31391 388 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 NRG3P56975 720 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 SOX8P57073 446 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 RNF4P78317 190 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 MXRA7P84157 204 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 PAGE3Q5JUK9 113 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 FHL5Q5TD97 284 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 REP15Q6BDI9 236 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 ANGPTL8Q6UXH0 198 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 HACD2Q6Y1H2 254 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 ARPINQ7Z6K5 226 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 DHDDSQ86SQ9 333 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 APLFQ8IW19 511 aaPredicted RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 TAGAPQ8N103 731 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 POU5F2Q8N7G0 328 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 ZNF615Q8N8J6 731 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 APCDD1LQ8NCL9 501 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 C17orf47Q8NEP4 570 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 NUBPLQ8TB37 319 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 APOBEC4Q8WW27 367 aaKnown RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 LRRC58Q96CX6 371 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 NUDT9Q9BW91 350 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 ACTRT3Q9BYD9 372 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 LHPPQ9H008 270 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 PAIP1Q9H074 479 aaKnown RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 ING2Q9H160 280 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 TPT1P8Q9HAU6 139 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 SIRT3Q9NTG7 399 aaPredicted RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 GIN1Q9NXP7 522 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 ABI3Q9P2A4 366 aa13.28□□□□□ -0.28
SKA2-205ENST00000580541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.28□□□□□ -0.28
SKA2-205ENST00000580541 MRTO4Q9UKD2 239 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms