RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SYBUQ9NX95 663 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 ARL15Q9NXU5 204 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 DKKL1Q9UK85 242 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 DHRS7Q9Y394 339 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 DYRK1BQ9Y463 629 aa12.54□□□□□ -0.4
CSNK1D-213ENST00000580446 VWC2LB2RUY7 222 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 B4DXG7 233 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 APRTP07741 180 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 COL6A2P12110 1019 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 MGAT1P26572 445 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 CLDN20P56880 219 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 IQCCQ4KMZ1 466 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 DUPD1Q68J44 220 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 ZNF470Q6ECI4 717 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 OR2L5Q8NG80 312 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 PEX13Q92968 403 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 F2RL3Q96RI0 385 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 REXO4Q9GZR2 422 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 PELI2Q9HAT8 420 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 FAIMQ9NVQ4 179 aa12.53□□□□□ -0.4
CSNK1D-213ENST00000580446 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.4
CSNK1D-213ENST00000580446 CADP27708 2225 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 A0A1W2PS29 197 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 CAPN14A8MX76 684 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 CBR3O75828 277 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 CLDN9O95484 217 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 ABCB1P08183 1280 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 ARAFP10398 606 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 SPOCK1Q08629 439 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 SLBPQ14493 270 aaKnown RBP eCLIP12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 DNAJC14Q6Y2X3 702 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 ATG4AQ8WYN0 398 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 RBM18Q96H35 190 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 FOXN4Q96NZ1 517 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 NDNQ99608 321 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 ANP32EQ9BTT0 268 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 SORBS1Q9BX66 1292 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 SNX15Q9NRS6 342 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 RAB6BQ9NRW1 208 aa12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 EXO1Q9UQ84 846 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-213ENST00000580446 A0A088AWK7 358 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 TCRBV7S2A1N4TA0A589 114 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 SYCE3A1L190 88 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 GOLGA6L9A6NEM1 432 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 E7EQL1 145 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 ZIC3O60481 467 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 IFNB1P01574 187 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 ALOX15P16050 662 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 ZNF10P21506 573 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 ABCD3P28288 659 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 PLIN5Q00G26 463 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 C18orf21Q32NC0 220 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 HLA-DQA1Q5Y7H0 255 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 FIGNL1Q6PIW4 674 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 UBE3DQ7Z6J8 389 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 THOC6Q86W42 341 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 C1QL4Q86Z23 238 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 KCNJ9Q92806 393 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 HGDQ93099 445 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 TCF12Q99081 682 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 CHP1Q99653 195 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 PLSCR4Q9NRQ2 329 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■■□□□ 13.8
CSNK1D-213ENST00000580446 PTBP2Q9UKA9 531 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 IKZF3Q9UKT9 509 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 SLC22A14Q9Y267 594 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 GPR52Q9Y2T5 361 aa12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSNK1D-213ENST00000580446 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 ERI2A8K979 691 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 SLCO1B7G3V0H7 640 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 TRIM77I1YAP6 450 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 ABCD4O14678 606 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 PLGP00747 810 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 FESP07332 822 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 C8GP07360 202 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 HIST1H2AGP0C0S8 130 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 KRT15P19012 456 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 HIST1H2ADP20671 130 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 OGNP20774 298 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 CPN2P22792 545 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 SRD5A2P31213 254 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 TTKP33981 857 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 CTBP2P56545 445 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 RPP38P78345 283 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 RCN2Q14257 317 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 C18orf63Q68DL7 685 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 NEPROQ6NW34 567 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 B3GLCTQ6Y288 498 aa12.5□□□□□ -0.41
CSNK1D-213ENST00000580446 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms