RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 TMED10P49755 219 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 LHX2P50458 406 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 GFRA1P56159 465 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 RPP38P78345 283 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 SRYQ05066 204 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 SBSNQ6UWP8 590 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 TMEM64Q6YI46 380 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 RNF111Q6ZNA4 994 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 ZBED8Q8IZ13 594 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 PYROXD1Q8WU10 500 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 CCT6BQ92526 530 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 RBM18Q96H35 190 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 NDNQ99608 321 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 ROGDIQ9GZN7 287 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 SAYSD1Q9NPB0 183 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 SNX15Q9NRS6 342 aa12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 PTBP2Q9UKA9 531 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-211ENST00000579316 PKD1L1Q8TDX9 2849 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 GNB5O14775 395 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 GPRIN2O60269 458 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ADAM11O75078 769 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 SCELO95171 688 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 GUCA1CO95843 209 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 RHOXF2BP0C7M4 288 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ZNF708P17019 499 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 GNAZP19086 355 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 KCNC1P48547 511 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 CLDN18P56856 261 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 IL2P60568 153 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 HERVK_113P63132 956 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ERVK-8P63133 956 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 SRSF2Q01130 221 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 PCDH1Q08174 1060 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 TGM3Q08188 693 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 SLBPQ14493 270 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 PPP1R3AQ16821 1122 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 TMEM249Q2WGJ8 235 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 TRIM42Q8IWZ5 723 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 CNEP1R1Q8N9A8 125 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 OR1J4Q8NGS1 313 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 FBXO25Q8TCJ0 367 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ANKRD7Q92527 254 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 AKAP1Q92667 903 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 PPWD1Q96BP3 646 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 CERS2Q96G23 380 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 KCNC2Q96PR1 638 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ERVK-6Q9BXR3 956 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 L2HGDHQ9H9P8 463 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 SPACA6W5XKT8 324 aa12.51□□□□□ -0.41
CSNK1D-211ENST00000579316 CDC7O00311 574 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 EMC8O43402 210 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 SOD3P08294 240 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 GSTA2P09210 222 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 DANCRP0C864 163 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 TBXA2RP21731 343 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 CDKN2DP55273 166 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 VLDLRP98155 873 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 FRG1Q14331 258 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 HSP90AA5PQ58FG0 334 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 UBE3DQ7Z6J8 389 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 IGDCC3Q8IVU1 814 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 OR4N5Q8IXE1 308 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 IFT20Q8IY31 132 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 ST13P4Q8IZP2 240 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 KRT78Q8N1N4 520 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 REPS1Q96D71 796 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 ZNF845Q96IR2 970 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 TBCDQ9BTW9 1192 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 SHARPINQ9H0F6 387 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 IARS2Q9NSE4 1012 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 HEY2Q9UBP5 337 aa12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 YLPM1P49750 1951 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-211ENST00000579316 ANKDD1BA6NHY2 528 aa12.49□□□□□ -0.41
CSNK1D-211ENST00000579316 SLC22A20A6NK97 555 aa12.49□□□□□ -0.41
CSNK1D-211ENST00000579316 PGRP06401 933 aa12.49□□□□□ -0.41
CSNK1D-211ENST00000579316 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-211ENST00000579316 DEKP35659 375 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-211ENST00000579316 KCNJ5P48544 419 aa12.49□□□□□ -0.41
CSNK1D-211ENST00000579316 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms