RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 CKAP4Q07065 602 aaKnown RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 RPA4Q13156 261 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 PDE7AQ13946 482 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 HAGHQ16775 308 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 LRRC38Q5VT99 294 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 FAM219BQ5XKK7 198 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 KCTD11Q693B1 232 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 TATDN1Q6P1N9 297 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 IGFL2Q6UWQ7 119 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 Q6ZRG5 221 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 TMCO5AQ8N6Q1 288 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 RELL2Q8NC24 303 aaPredicted RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 TRPV3Q8NET8 790 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 PRCCQ92733 491 aaPredicted RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 AP2M1Q96CW1 435 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 TMEM237Q96Q45 408 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 SDHCQ99643 169 aaPredicted RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 KIR2DL4Q99706 377 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 AGPAT1Q99943 283 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 MAPKAP1Q9BPZ7 522 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 JPH2Q9BR39 696 aaPredicted RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 ACAT2Q9BWD1 397 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 MRPL9Q9BYD2 267 aaKnown RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 TRIM9Q9C026 710 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 CUEDC2Q9H467 287 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 KCNMB3Q9NPA1 279 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 AKAP7Q9P0M2 348 aaPredicted RBP1.58□□□□□ -2.16
TOP2A-202ENST00000577541 MTRRQ9UBK8 725 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 FER1L5A0AVI2 2057 aa1.58□□□□□ -2.16
TOP2A-202ENST00000577541 FAM170AA1A519 330 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 FRG2CA6NGY1 282 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CHUKO15111 745 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 ADAM12O43184 909 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 PSMD3O43242 534 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 STX6O43752 255 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 RTN2O75298 545 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 BCAS2O75934 225 aaPredicted RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 ANXA9O76027 345 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 APBB3O95704 486 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 GOT2P00505 430 aaKnown RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 FCER2P06734 321 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 PROS1P07225 676 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CT45A10P0DMU9 189 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CYP3A5P20815 502 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CTNNB1P35222 781 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 TNFSF10P50591 281 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 NDST1P52848 882 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 PRKCEQ02156 737 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 P2RY14Q15391 338 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 QRICH1Q2TAL8 776 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 DCAF12Q5T6F0 453 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 TAF3Q5VWG9 929 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF544Q6NX49 715 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CD164L2Q6UWJ8 174 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 STOX1Q6ZVD7 989 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CCDC91Q7Z6B0 441 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 FBXO16Q8IX29 292 aaPredicted RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CLYBLQ8N0X4 340 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 MSANTD4Q8NCY6 345 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 NEK11Q8NG66 645 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 FBXO25Q8TCJ0 367 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 UBLCP1Q8WVY7 318 aaPredicted RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 GGHQ92820 318 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 ULK4Q96C45 1275 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 MRPL38Q96DV4 380 aaKnown RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 DTD2Q96FN9 168 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 CDKN2AIPNLQ96HQ2 116 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 MAGEB18Q96M61 343 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 C9orf85Q96MD7 179 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 HES7Q9BYE0 225 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF702PQ9H963 129 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 ELL3Q9HB65 397 aaPredicted RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 IL1RAPL2Q9NP60 686 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 SPG21Q9NZD8 308 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 RPS6KB2Q9UBS0 482 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 APOBEC3BQ9UH17 382 aaKnown RBP1.57□□□□□ -2.16
TOP2A-202ENST00000577541 TEKT2Q9UIF3 430 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 FBXL5Q9UKA1 691 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 STX8Q9UNK0 236 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 NUDCQ9Y266 331 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 KLHDC2Q9Y2U9 406 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 RPGRIP1LQ68CZ1 1315 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 GPRASP1Q5JY77 1395 aa1.57□□□□□ -2.16
TOP2A-202ENST00000577541 PINLYPA6NC86 204 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 CCDC69A6NI79 296 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 MEI4A8MW99 385 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 A8MX80 341 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 SLC17A2O00624 439 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF861PO60384 105 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 SERF1AO75920 110 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 PTBP3O95758 552 aaKnown RBP1.56□□□□□ -2.16
TOP2A-202ENST00000577541 IGLV1-47P01700 117 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 GSTA2P09210 222 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 PVRP15151 417 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 UGT1A6P19224 532 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 FCARP24071 287 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 CALML3P27482 149 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 RPA1P27694 616 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 TRIM23P36406 574 aa1.56□□□□□ -2.16
TOP2A-202ENST00000577541 XCR1P46094 333 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms