RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 PCDHGA2Q9Y5H1 932 aa5.4□□□□□ -1.54
CTNS-210ENST00000576979 KLK4Q9Y5K2 254 aa5.4□□□□□ -1.54
CTNS-210ENST00000576979 HCFC2Q9Y5Z7 792 aa5.4□□□□□ -1.54
CTNS-210ENST00000576979 ENPP4Q9Y6X5 453 aa5.4□□□□□ -1.54
CTNS-210ENST00000576979 PTPRSQ13332 1948 aa5.4□□□□□ -1.55
CTNS-210ENST00000576979 CKAP5Q14008 2032 aa5.4□□□□□ -1.55
CTNS-210ENST00000576979 TCF20Q9UGU0 1960 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 A0A1W2PRB8 838 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TRBC2A0A5B9 178 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 SLC5A10A0PJK1 596 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TSPAN11A1L157 253 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 PIPSLA2A3N6 862 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 KRT87PA6NCN2 255 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 ARRDC5A6NEK1 342 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CCRL2O00421 344 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 HAT1O14929 419 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 YY2O15391 372 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 PQBP1O60828 265 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 COQ9O75208 318 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 ETHE1O95571 254 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 OXSR1O95747 527 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 FGF19O95750 216 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 C1QCP02747 245 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 SCG5P05408 212 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 ELFN1P0C7U0 828 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 PIPP12273 146 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 ZNF8P17098 575 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 TYRP1P17643 537 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TNFRSF1BP20333 461 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CD72P21854 359 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 UQCRC2P22695 453 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 DDX6P26196 483 aaKnown RBP eCLIP5.39□□□□□ -1.55
CTNS-210ENST00000576979 C21orf33P30042 268 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 HLA-FP30511 346 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 PPM1AP35813 382 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TGFBR1P36897 503 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 ECI1P42126 302 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 XCR1P46094 333 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 RGS6P49758 472 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CRISP1P54107 249 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 SMIM11AP58511 58 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TBPL1P62380 186 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 IFITM3Q01628 133 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 FPGSQ05932 587 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 DLX2Q07687 328 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 ST3GAL4Q11206 333 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CNTN1Q12860 1018 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TMEM115Q12893 351 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 IRF3Q14653 427 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 SLC9A5Q14940 896 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 MED22Q15528 200 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 NDUFA5Q16718 116 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TSTQ16762 297 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 PRSS53Q2L4Q9 553 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 HENMT1Q5T8I9 393 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 MEDAGQ5VYS4 303 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TMEM53Q6P2H8 277 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 UNC5DQ6UXZ4 953 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.39□□□□□ -1.55
CTNS-210ENST00000576979 Q6ZPB1 254 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 Q6ZVL8 140 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 PTCHD4Q6ZW05 846 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 IKBIPQ70UQ0 350 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 GAREM2Q75VX8 874 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 DPPA4Q7L190 304 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 COMMD6Q7Z4G1 85 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 FAM124AQ86V42 546 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 HEATR4Q86WZ0 1026 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 RNF130Q86XS8 419 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 SNX29P2Q8IUI4 249 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CCDC103Q8IW40 242 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 LAS2Q8IYD9 372 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 GPR65Q8IYL9 337 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 NRSN1Q8IZ57 195 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 KRT78Q8N1N4 520 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 METTL4Q8N3J2 472 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 RASGEF1AQ8N9B8 481 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 AQP11Q8NBQ7 271 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 FAM46DQ8NEK8 389 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 OR9Q2Q8NGE9 314 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 OR52J3Q8NH60 311 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 WDR36Q8NI36 951 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 SLC5A11Q8WWX8 675 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 SCAMP4Q969E2 229 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 MAL2Q969L2 176 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 AP2M1Q96CW1 435 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TXNDC15Q96J42 360 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 LRIG1Q96JA1 1093 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 LMLNQ96KR4 655 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 TEFMQ96QE5 360 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 ZFYVE21Q9BQ24 234 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CCDC32Q9BV29 185 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 ROGDIQ9GZN7 287 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 NUAK2Q9H093 628 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 OR51E2Q9H255 320 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 AMBNQ9NP70 447 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 EXOSC4Q9NPD3 245 aaKnown RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 DMRT3Q9NQL9 472 aa5.39□□□□□ -1.55
CTNS-210ENST00000576979 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
CTNS-210ENST00000576979 DYRK4Q9NR20 520 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms