RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PCDHGA9Q9Y5G4 932 aaKnown RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 HRH3Q9Y5N1 445 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SHANK1Q9Y566 2161 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 FLNCQ14315 2725 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 UBR5O95071 2799 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 GABRR3A8MPY1 467 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 C17orf51A8MQB3 221 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 G3V3Y1 287 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SCAMP2O15127 329 aaKnown RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ZNHIT1O43257 154 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR2J2O76002 312 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR6B1O95007 311 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 NADKO95544 446 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 CBX7O95931 251 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ALPPP05187 535 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 CYC1P08574 325 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 LAMP1P11279 417 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 S1PR1P21453 382 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 IL12AP29459 219 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 TLX1P31314 330 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PGM1P36871 562 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 MC3RP41968 323 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ZFP36L2P47974 494 aaKnown RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 NCBP2P52298 156 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 MLLT10P55197 1068 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SLC37A1P57057 533 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SOX8P57073 446 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 RNF4P78317 190 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 HSPB3Q12988 150 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 MFAP5Q13361 173 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 TUBA3CQ13748 450 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PDE7AQ13946 482 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 EBPQ15125 230 aaKnown RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 EXT1Q16394 746 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 GSTA3Q16772 222 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PLEKHN1Q494U1 663 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 COQ5Q5HYK3 327 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ACER2Q5QJU3 275 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 AGAP7PQ5VUJ5 663 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SPINK14Q6IE38 97 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 TUBA3EQ6PEY2 450 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PRICKLE2Q7Z3G6 844 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SPATA19Q7Z5L4 167 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 FUNDC1Q8IVP5 155 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 GALNT12Q8IXK2 581 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ULK2Q8IYT8 1036 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ST13P4Q8IZP2 240 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 CLECL1Q8IZS7 167 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ARHGAP24Q8N264 748 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 LRRC25Q8N386 305 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ZNF615Q8N8J6 731 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR7G2Q8NG99 324 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR52R1Q8NGF1 315 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR9I1Q8NGQ6 314 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR1N1Q8NGS0 311 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 OR14A16Q8NHC5 309 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 M1APQ8TC57 530 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 TSPEARQ8WU66 669 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 TANKQ92844 425 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 RIT1Q92963 219 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 NACC2Q96BF6 587 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 VMP1Q96GC9 406 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SENP5Q96HI0 755 aaPredicted RBP7.33□□□□□ -1.24
CCDC40-215ENST00000576033 MAGED4Q96JG8 741 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PPP3R2Q96LZ3 170 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 AGAP4Q96P64 663 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ITPAQ9BY32 194 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ADNPQ9H2P0 1102 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 GLIPR2Q9H4G4 154 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 WDR41Q9HAD4 459 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 MIEF1Q9NQG6 463 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 SLC35C2Q9NQQ7 365 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 KLHL1Q9NR64 748 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PLSCR2Q9NRY7 297 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 AIG1Q9NVV5 245 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 NMRK1Q9NWW6 199 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 ASIC5Q9NY37 505 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 GPR45Q9Y5Y3 372 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 CLCA3PQ9Y6N3 262 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 CNTRLQ7Z7A1 2325 aa7.33□□□□□ -1.24
CCDC40-215ENST00000576033 PINLYPA6NC86 204 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 BBIP1A8MTZ0 92 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 FBP2O00757 339 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ANKRD28O15084 1053 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ITGA10O75578 1167 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 SORBS2O94875 1100 aaKnown RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ATP1B1P05026 303 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 SLC35E2P0CK97 266 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 IDO1P14902 403 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 PORP16435 677 aaPredicted RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 RFC3P40938 356 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 SOX3P41225 446 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 CLCN2P51788 898 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 MLF1P58340 268 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 UFM1P61960 85 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 TRA2BP62995 288 aaKnown RBP7.32□□□□□ -1.24
CCDC40-215ENST00000576033 PHC1P78364 1004 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 ARG2P78540 354 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 SLC25A3Q00325 362 aa7.32□□□□□ -1.24
CCDC40-215ENST00000576033 CYLC2Q14093 348 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms