RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SNX8Q9Y5X2 465 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 RAI1Q7Z5J4 1906 aaPredicted RBP5.32□□□□□ -1.56
SMG6-219ENST00000575663 HEATR5BQ9P2D3 2071 aa5.32□□□□□ -1.56
SMG6-219ENST00000575663 A0A096LNT2 108 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 MIF4GDA9UHW6 222 aaKnown RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 KIAA0513O60268 411 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 CGAP01215 116 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 THBDP07204 575 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 CD3EP07766 207 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 C1GALT1C1LP0DN25 315 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 IGHV4-31P0DP07 118 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ALOX15P16050 662 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 CREB1P16220 341 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SRD5A2P31213 254 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SSR2P43308 183 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 KIR2DL2P43627 348 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 GYS2P54840 703 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 GFRA1P56159 465 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 CLDN18P56856 261 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SLC37A1P57057 533 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 EEFSECP57772 596 aaKnown RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 IL2P60568 153 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ACTG1P63261 375 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 IGLV3-21P80748 117 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 SARNPP82979 210 aaKnown RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 CDK16Q00536 496 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 FUT7Q11130 342 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 PDAP1Q13442 181 aaKnown RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 ZNF267Q14586 743 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 OASLQ15646 514 aaKnown RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 ADPRMQ3LIE5 342 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ZNF672Q499Z4 452 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 FAM120AOSQ5T036 256 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SEL1L2Q5TEA6 688 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 C6orf163Q5TEZ5 329 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SLC30A6Q6NXT4 461 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 TMEM81Q6P7N7 255 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 C4orf22Q6V702 233 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 C22orf34Q6ZV56 151 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 IL17RELQ6ZVW7 336 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 UBQLNLQ8IYU4 475 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ARIH2OSQ8N7S6 290 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ZNF610Q8N9Z0 462 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 RDH11Q8TC12 318 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 PPWD1Q96BP3 646 aaKnown RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 VPS39Q96JC1 886 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 C16orf45Q96MC5 204 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 NDNQ99608 321 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 NAPGQ99747 312 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 EGFL8Q99944 293 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 MAPKAP1Q9BPZ7 522 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 DESI2Q9BSY9 194 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 FAM167BQ9BTA0 163 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 NTMT1Q9BV86 223 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ACTR6Q9GZN1 396 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 RRAGDQ9NQL2 400 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 MS4A12Q9NXJ0 267 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 WWOXQ9NZC7 414 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 GDF2Q9UK05 429 aaPredicted RBP5.31□□□□□ -1.56
SMG6-219ENST00000575663 DKKL1Q9UK85 242 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SLC22A14Q9Y267 594 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 ZNF175Q9Y473 711 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 MPDZO75970 2070 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 SCN3AQ9NY46 2000 aa5.31□□□□□ -1.56
SMG6-219ENST00000575663 MEGF8Q7Z7M0 2845 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 GRID2IPA4D2P6 1211 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 ELOA3DA6NLF2 546 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 HRKO00198 91 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 NDUFS7O75251 213 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 WDR47O94967 919 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 PLGP00747 810 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 THBS1P07996 1170 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 F7P08709 466 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 CSF3P09919 207 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 PEPDP12955 493 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 ETS1P14921 441 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 ITGA2P17301 1181 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 EGR1P18146 543 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TPSB2P20231 275 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 HIST1H1TP22492 207 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 PAX7P23759 505 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TLX1P31314 330 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 BUD31P41223 144 aaPredicted RBP5.3□□□□□ -1.56
SMG6-219ENST00000575663 STARP49675 285 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 HNMTP50135 292 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 NEK2P51955 445 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 SNTA1Q13424 505 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TPSAB1Q15661 275 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 BCL2A1Q16548 175 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 WHAMMP3Q1A5X7 153 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 AP5B1Q2VPB7 878 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 ELOA3BQ3SY89 546 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 FAM174BQ3ZCQ3 159 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 ALKBH2Q6NS38 261 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 PAQR3Q6TCH7 311 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 SYT10Q6XYQ8 523 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 TMEM64Q6YI46 380 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 STAC2Q6ZMT1 411 aa5.3□□□□□ -1.56
SMG6-219ENST00000575663 BEND4Q6ZU67 534 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms