RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RAD51AP1Q96B01 352 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 NUS1Q96E22 293 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 RNFT2Q96EX2 444 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 ZBED6CLQ96FA7 236 aaPredicted RBP18■□□□□ 0.47
SCARF1-206ENST00000573852 LINC00615Q96LM1 132 aaPredicted RBP18■□□□□ 0.47
SCARF1-206ENST00000573852 FRMD6Q96NE9 622 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 DPEP2Q9H4A9 486 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 EGLN3Q9H6Z9 239 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 P2RX2Q9UBL9 471 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 TRPC4Q9UBN4 977 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 NDRG2Q9UN36 371 aaKnown RBP18■□□□□ 0.47
SCARF1-206ENST00000573852 GPR52Q9Y2T5 361 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 A0A0G2JN53 185 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 PSMB5P28074 263 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 CD79BP40259 229 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 CD83Q01151 205 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 KLHL22Q53GT1 634 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 ZNF628Q5EBL2 1059 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 C1orf94Q6P1W5 598 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 ZNF730Q6ZMV8 503 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 SHFQ7M4L6 423 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 C11orf96Q7Z7L8 435 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 ATP6V1C2Q8NEY4 427 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 HCAR2Q8TDS4 363 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 UBASH3BQ8TF42 649 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 MED18Q9BUE0 208 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 C17orf113A0A1B0GUU1 675 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 NR2F6P10588 404 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 ACP2P11117 423 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 PTGER1P34995 402 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 MKI67P46013 3256 aaKnown RBP17.99■□□□□ 0.47
SCARF1-206ENST00000573852 FABP5Q01469 135 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 TPBGQ13641 420 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 QSOX2Q6ZRP7 698 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 NATD1Q8N6N6 113 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 ZFP41Q8N8Y5 198 aa17.99■□□□□ 0.47
SCARF1-206ENST00000573852 ACADMP11310 421 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 KELP23276 732 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 APEX1P27695 318 aaKnown RBP17.98■□□□□ 0.47
SCARF1-206ENST00000573852 NDUFA9Q16795 377 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 SNAP47Q5SQN1 464 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 ABI3BPQ7Z7G0 1075 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 ZNF557Q8N988 423 aaPredicted RBP17.98■□□□□ 0.47
SCARF1-206ENST00000573852 SLC9A6Q92581 669 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 SLC35G5Q96KT7 338 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 PRR14Q9BWN1 585 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 ANKRA2Q9H9E1 313 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 FGF20Q9NP95 211 aaPredicted RBP17.98■□□□□ 0.47
SCARF1-206ENST00000573852 H7BY64 318 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 RFXAPO00287 272 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 PPM1DO15297 605 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 SMSP52788 366 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 ENTPD8Q5MY95 495 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 UBE3DQ7Z6J8 389 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 C11orf74Q86VG3 221 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 GLCCI1Q86VQ1 547 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 PRAP1Q96NZ9 151 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 AIF1LQ9BQI0 150 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 GLIPR2Q9H4G4 154 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 MRPS18AQ9NVS2 196 aaKnown RBP17.98■□□□□ 0.47
SCARF1-206ENST00000573852 PCDH10Q9P2E7 1040 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 COMMD3Q9UBI1 195 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 MAU2Q9Y6X3 613 aa17.98■□□□□ 0.47
SCARF1-206ENST00000573852 TMEM129A0AVI4 362 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 SLC30A4O14863 429 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 TPD52L2O43399 206 aaKnown RBP17.97■□□□□ 0.47
SCARF1-206ENST00000573852 YES1P07947 543 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 MAN2A2P49641 1150 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 PPP2R2DQ66LE6 453 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 KIAA1211LQ6NV74 962 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 TMEM163Q8TC26 289 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 ZFYVE19Q96K21 471 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 COL4A3Q01955 1670 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 PRODHO43272 600 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 FGF18O76093 207 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 CXCL14O95715 111 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 LIMS3P0CW19 117 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 LIMS4P0CW20 117 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 C6P13671 934 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 SOX18P35713 384 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 RAB40BQ12829 278 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 PAMR1Q6UXH9 720 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 OR8D4Q8NGM9 314 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 TFGQ92734 400 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-206ENST00000573852 KIAA1143Q96AT1 154 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-206ENST00000573852 ARRDC3Q96B67 414 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 DCLRE1CQ96SD1 692 aaKnown RBP17.97■□□□□ 0.47
SCARF1-206ENST00000573852 YIPF4Q9BSR8 244 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 SAP130Q9H0E3 1048 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 ACSS1Q9NUB1 689 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-206ENST00000573852 MALT1Q9UDY8 824 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 SLC9A8Q9Y2E8 581 aa17.97■□□□□ 0.47
SCARF1-206ENST00000573852 CHRM4P08173 479 aa17.96■□□□□ 0.47
SCARF1-206ENST00000573852 MLLT3P42568 568 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-206ENST00000573852 SLC6A11P48066 632 aa17.96■□□□□ 0.47
SCARF1-206ENST00000573852 MAP4K2Q12851 820 aa17.96■□□□□ 0.47
SCARF1-206ENST00000573852 QPRTQ15274 297 aa17.96■□□□□ 0.47
SCARF1-206ENST00000573852 ZNF77Q15935 545 aa17.96■□□□□ 0.47
SCARF1-206ENST00000573852 YIF1BQ5BJH7 314 aa17.96■□□□□ 0.47
SCARF1-206ENST00000573852 NUDT13Q86X67 352 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms