RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TEX10Q9NXF1 929 aaPredicted RBP14.77□□□□□ -0.05
NUP88-207ENST00000573584 GSTK1Q9Y2Q3 226 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 TMEM98Q9Y2Y6 226 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 WNT6Q9Y6F9 365 aa14.77□□□□□ -0.05
NUP88-207ENST00000573584 PLXND1Q9Y4D7 1925 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 TMPRSS11DO60235 418 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 PAPLNO95428 1278 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 ACP2P11117 423 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 PPP2R1BP30154 601 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 GAS1P54826 345 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 TPBGQ13641 420 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 ZNF628Q5EBL2 1059 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 TYW3Q6IPR3 259 aaKnown RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 KIAA1211LQ6NV74 962 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 LINC00471Q8N535 108 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 UFD1Q92890 307 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 FGF11Q92914 225 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 KIAA1143Q96AT1 154 aaPredicted RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 ZNF514Q96K75 400 aaPredicted RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 SLC35G5Q96KT7 338 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 LINC00615Q96LM1 132 aaPredicted RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 PLA2G12AQ9BZM1 189 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 GPR52Q9Y2T5 361 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 SF3B6Q9Y3B4 125 aaKnown RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 TMEM129A0AVI4 362 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 PRODHO43272 600 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 APEX1P27695 318 aaKnown RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 LCN1P1Q5VSP4 162 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 CNKSR3Q6P9H4 555 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 MORN4Q8NDC4 146 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 OR52A5Q9H2C5 316 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 EGLN3Q9H6Z9 239 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 LHX9Q9NQ69 397 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 NDRG2Q9UN36 371 aaKnown RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 SNTNA6NMZ2 147 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 H7BY64 318 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 SPINT1O43278 529 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 MTNR1AP48039 350 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 DEFB103AP81534 67 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 FABP5Q01469 135 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 ENTPD8Q5MY95 495 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 SNAP47Q5SQN1 464 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 PLET1Q6UQ28 207 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 QSOX2Q6ZRP7 698 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 C11orf74Q86VG3 221 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 NUDT13Q86X67 352 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 TMEM163Q8TC26 289 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 PRAP1Q96NZ9 151 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 SLA2Q9H6Q3 261 aa14.76□□□□□ -0.05
NUP88-207ENST00000573584 FGF20Q9NP95 211 aaPredicted RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 ACSS1Q9NUB1 689 aaPredicted RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 ZCCHC3Q9NUD5 404 aaKnown RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 MRPS18AQ9NVS2 196 aaKnown RBP14.76□□□□□ -0.05
NUP88-207ENST00000573584 CASKO14936 926 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 SLC2A2P11168 524 aaPredicted RBP14.75□□□□□ -0.05
NUP88-207ENST00000573584 BUD31P41223 144 aaPredicted RBP14.75□□□□□ -0.05
NUP88-207ENST00000573584 PRKAG1P54619 331 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 Q5BKY6 102 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 PPP2R2DQ66LE6 453 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 SHFQ7M4L6 423 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 KIF18BQ86Y91 864 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 ZFP41Q8N8Y5 198 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 C19orf18Q8NEA5 215 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 TFGQ92734 400 aaPredicted RBP14.75□□□□□ -0.05
NUP88-207ENST00000573584 ZBP1Q9H171 429 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 GPR34Q9UPC5 381 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 PCYT1BQ9Y5K3 369 aaPredicted RBP14.75□□□□□ -0.05
NUP88-207ENST00000573584 MAU2Q9Y6X3 613 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 A0A0G2JN53 185 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 FAM25AB3EWG3 89 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 FAM25CB3EWG5 89 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 FAM25GB3EWG6 89 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 LZTS3O60299 673 aaPredicted RBP14.75□□□□□ -0.05
NUP88-207ENST00000573584 GSTM3P21266 225 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 GABRA5P31644 462 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 MAN2A2P49641 1150 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 SLC27A4Q6P1M0 643 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 SLC36A4Q6YBV0 504 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 DCUN1D3Q8IWE4 304 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 Q8N402 240 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 C17orf50Q8WW18 174 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 SAP130Q9H0E3 1048 aa14.75□□□□□ -0.05
NUP88-207ENST00000573584 IRGMA1A4Y4 181 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 WASHC1A8K0Z3 465 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 CXCL14O95715 111 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 EPPINO95925 133 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 C6P13671 934 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 PSMB5P28074 263 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 CCR8P51685 355 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 YIF1BQ5BJH7 314 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 TRIQKQ629K1 86 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 PAMR1Q6UXH9 720 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 WASH2PQ6VEQ5 465 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 C11orf96Q7Z7L8 435 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 LHFPL3Q86UP9 236 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 AMER3Q8N944 861 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 ANKK1Q8NFD2 765 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 TEX47Q8TBZ9 253 aa14.74□□□□□ -0.05
NUP88-207ENST00000573584 RGMAQ96B86 450 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms