RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 METTL4Q8N3J2 472 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 LRRN4CLQ8ND94 238 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PSD4Q8NDX1 1056 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 C16orf52Q8NHV5 167 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ACMSDQ8TDX5 336 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SELENOMQ8WWX9 145 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 RIT1Q92963 219 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 UCN3Q969E3 161 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 RASL10BQ96S79 203 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PELOQ9BRX2 385 aaKnown RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 ERVK-6Q9BXR3 956 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 MRPL1Q9BYD6 325 aaKnown RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 EPB41L4BQ9H329 900 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.88□□□□□ -1.31
NUP88-205ENST00000572809 NMRK1Q9NWW6 199 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 PSMC3IPQ9P2W1 217 aaPredicted RBP6.88□□□□□ -1.31
NUP88-205ENST00000572809 SH3BGRL2Q9UJC5 107 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZNF225Q9UK10 706 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ADAM29Q9UKF5 820 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SNX6Q9UNH7 406 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 SLC12A4Q9UP95 1085 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ZNF835Q9Y2P0 537 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 ICE1Q9Y2F5 2266 aa6.88□□□□□ -1.31
NUP88-205ENST00000572809 COL12A1Q99715 3063 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 UTP20O75691 2785 aaKnown RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 A0A1W2PPM1 405 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 HRKO00198 91 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 TFECO14948 347 aaPredicted RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 ZNHIT1O43257 154 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 HS6ST1O60243 411 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 OR10H2O60403 315 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 GUCY1B2O75343 617 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 ULK1O75385 1050 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 PPM1BO75688 479 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 AIFM1O95831 613 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 KRT6AP02538 564 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 KRT6BP04259 564 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 IGKV3-11P04433 115 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 GSTA1P08263 222 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 NR2F6P10588 404 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 ABOP16442 354 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 PIK3R1P27986 724 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 RFC3P40938 356 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 CCT5P48643 541 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 KRT6CP48668 564 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 XKP51811 444 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 PRKAA2P54646 552 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 GPR85P60893 370 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 ERVK-8P63133 956 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 HSF1Q00613 529 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 ASPHQ12797 758 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 RASA2Q15283 850 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 C3AR1Q16581 482 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 NDUFAF5Q5TEU4 345 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 SP5Q6BEB4 398 aaPredicted RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 Q6ZPB1 254 aaPredicted RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 RTL4Q6ZR62 310 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 SLC29A4Q7RTT9 530 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 MRGPRGQ86SM5 289 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 GSPT2Q8IYD1 628 aaKnown RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 SLC15A4Q8N697 577 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 CDYL2Q8N8U2 506 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 ZFP62Q8NB50 900 aaPredicted RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 OR4K14Q8NGD5 310 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 NUBPLQ8TB37 319 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 METTL6Q8TCB7 284 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 DOK4Q8TEW6 326 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 MZB1Q8WU39 189 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 UBLCP1Q8WVY7 318 aaPredicted RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 UTP4Q969X6 686 aaKnown RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 TM4SF18Q96CE8 201 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 FBXL20Q96IG2 436 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 MAGED4Q96JG8 741 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 SGCZQ96LD1 299 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 CNPPD1Q9BV87 410 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 L2HGDHQ9H9P8 463 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 BRF2Q9HAW0 419 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 FARSBQ9NSD9 589 aaKnown RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 DEPPQ9NTK1 212 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 TEX10Q9NXF1 929 aaPredicted RBP6.87□□□□□ -1.31
NUP88-205ENST00000572809 TRPS1Q9UHF7 1281 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 GRID1Q9ULK0 1009 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 ERVK-19Q9WJR5 959 aa6.87□□□□□ -1.31
NUP88-205ENST00000572809 A0A1B0GTH9 108 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 C1orf226A1L170 272 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 OR6C76A6NM76 312 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 MANBAO00462 879 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PRRG2O14669 202 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 CDC40O60508 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
NUP88-205ENST00000572809 ZNF354AO60765 605 aaPredicted RBP6.86□□□□□ -1.31
NUP88-205ENST00000572809 GLRA3O75311 464 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PDE9AO76083 593 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 SHBGP04278 402 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 P04436 131 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PORP16435 677 aaPredicted RBP6.86□□□□□ -1.31
NUP88-205ENST00000572809 KRT15P19012 456 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 HMOX2P30519 316 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 PTGS2P35354 604 aa6.86□□□□□ -1.31
NUP88-205ENST00000572809 DEKP35659 375 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms