RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 VDRP11473 427 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 FOLR1P15328 257 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 NAGAP17050 411 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 GM2AP17900 193 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 IL11P20809 199 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 PON1P27169 355 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CCR1P32246 355 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 RFX2P48378 723 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 MFAP4P55083 255 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 ACTN3Q08043 901 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CDC16Q13042 620 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 HNF4GQ14541 408 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CASP8Q14790 479 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 PCLAFQ15004 111 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CCDC92Q53HC0 331 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-214ENST00000572365 RAB6CQ53S08 254 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 PPP6R3Q5H9R7 873 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-214ENST00000572365 LRIF1Q5T3J3 769 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 C1QTNF12Q5T7M4 302 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 GGNBP1Q5YKI7 109 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 ALS2CLQ60I27 953 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 DPY19L2P1Q6NXN4 242 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 PNCKQ6P2M8 343 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 LCLAT1Q6UWP7 414 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 C3P1Q6ZMU1 363 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 COLCA1Q6ZS62 124 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 Q6ZTK2 550 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 SHFQ7M4L6 423 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CTAGE6Q86UF2 777 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CTAGE4Q8IX94 777 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 LMNTD2Q8IXW0 634 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 SCML4Q8N228 414 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 GUF1Q8N442 669 aaKnown RBP5.01□□□□□ -1.61
SF3B3-214ENST00000572365 SPATA6LQ8N4H0 392 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 POC5Q8NA72 575 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 DCAF4L2Q8NA75 395 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 TRPC4APQ8TEL6 797 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 TSC22D3Q99576 134 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 SH3GL2Q99962 352 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CCDC28BQ9BUN5 200 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 DNAI2Q9GZS0 605 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 RAB6CQ9H0N0 254 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 NDST4Q9H3R1 872 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 PPP1R3EQ9H7J1 279 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 RAB20Q9NX57 234 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 ELOVL5Q9NYP7 299 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 RCOR1Q9UKL0 485 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 CMAHPQ9Y471 501 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 PKD1L1Q8TDX9 2849 aa5.01□□□□□ -1.61
SF3B3-214ENST00000572365 SONP18583 2426 aaKnown RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 RPS10-NUDT3A0A1W2PQS6 291 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 C1orf226A1L170 272 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 OR2A25A4D2G3 310 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 NDUFAB1O14561 156 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 CTDSP2O14595 271 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 EIF3HO15372 352 aaKnown RBP eCLIP5□□□□□ -1.61
SF3B3-214ENST00000572365 HSPA12AO43301 675 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 RGS14O43566 566 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 SPRY3O43610 288 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 BUB1O43683 1085 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 MITFO75030 526 aaPredicted RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 LY6G6DO95868 133 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 IGLV3-25P01717 112 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 GSTA1P08263 222 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 GSTA2P09210 222 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 EPB41P11171 864 aaKnown RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 PSG1P11464 419 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 IDO1P14902 403 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 AMD1P17707 334 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 GTF2H1P32780 548 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 KRT20P35900 424 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 SNRPD1P62314 119 aaKnown RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 GNA12Q03113 381 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 EIF4EBP2Q13542 120 aaPredicted RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 CUL2Q13617 745 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 SNTB1Q13884 538 aaKnown RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 NTRK2Q16620 822 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 UGP2Q16851 508 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 CBWD6Q4V339 395 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 CMPK2Q5EBM0 449 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 CBWD3Q5JTY5 395 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 TTC19Q6DKK2 380 aaPredicted RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 SIGIRRQ6IA17 410 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 WDR74Q6RFH5 385 aaPredicted RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 GFRALQ6UXV0 394 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 SYVN1Q86TM6 617 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 LCA5Q86VQ0 697 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 C12orf56Q8IXR9 622 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 ZNF683Q8IZ20 524 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 ZADH2Q8N4Q0 377 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 KIAA0895Q8NCT3 520 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 OR2AP1Q8NGE2 309 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5□□□□□ -1.61
SF3B3-214ENST00000572365 SLC22A18Q96BI1 424 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 C9orf72Q96LT7 481 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 ZNF396Q96N95 335 aaPredicted RBP5□□□□□ -1.61
SF3B3-214ENST00000572365 LRFN5Q96NI6 719 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 SMIM14Q96QK8 99 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 PCGF1Q9BSM1 259 aa5□□□□□ -1.61
SF3B3-214ENST00000572365 HAUS8Q9BT25 410 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms