RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SLC47A1Q96FL8 570 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 CHMP6Q96FZ7 201 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 MED30Q96HR3 178 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 ANKRD36BP1Q96IX9 119 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 ZNF583Q96ND8 569 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 TTC25Q96NG3 672 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 SERPINB12Q96P63 405 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 XPO6Q96QU8 1125 aaKnown RBP3.36□□□□□ -1.87
UBR1-211ENST00000569971 MAP3K3Q99759 626 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 C17orf62Q9BQA9 187 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 C11orf70Q9BRQ4 267 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 C1QTNF4Q9BXJ3 329 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 FRMD8P1Q9BZ68 369 aaPredicted RBP3.36□□□□□ -1.87
UBR1-211ENST00000569971 SDCBP2Q9H190 292 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 DDX31Q9H8H2 851 aaKnown RBP3.36□□□□□ -1.87
UBR1-211ENST00000569971 EVA1AQ9H8M9 152 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 ACP6Q9NPH0 428 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 FGF21Q9NSA1 209 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 INTS9Q9NV88 658 aaKnown RBP3.36□□□□□ -1.87
UBR1-211ENST00000569971 IL19Q9UHD0 177 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 SLC12A6Q9UHW9 1150 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 BRCA1P38398 1863 aaKnown RBP3.36□□□□□ -1.87
UBR1-211ENST00000569971 A0A0G2JMZ2 1700 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 WDR90Q96KV7 1748 aa3.36□□□□□ -1.87
UBR1-211ENST00000569971 RLFQ13129 1914 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TRAV18A0A075B6X5 111 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 A0A087X0K7 114 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 A0A1W2PN81 502 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ASB14A6NK59 587 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 NPIPA3F8WFD2 350 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 C16orf97H3BN30 126 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ACSL4O60488 711 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CDH16O75309 829 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 B3GALNT1O75752 331 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TTC4O95801 387 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CALCAP01258 141 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 APOHP02749 345 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 SHBGP04278 402 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 KRT7P08729 469 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 MCF2P10911 925 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RALAP11233 206 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 FGF5P12034 268 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 DARSP14868 501 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 TYMPP19971 482 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 EFNA1P20827 205 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 LHCGRP22888 699 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TMOD1P28289 359 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SFTPDP35247 375 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CHRNA7P36544 502 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 HOXA1P49639 335 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 THBS3P49746 956 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 GAS1P54826 345 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CASP9P55211 416 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 MAZP56270 477 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 STARD6P59095 220 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 MYL6P60660 151 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 PITX1P78337 314 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 TFAMQ00059 246 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 WASHC5Q12768 1159 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TRAP1Q12931 704 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 IFT88Q13099 833 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 PDE7AQ13946 482 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SQLEQ14534 574 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ITIH4Q14624 930 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 MAPK11Q15759 364 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 GPR33Q49SQ1 333 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TFDP3Q5H9I0 405 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SLC35D3Q5M8T2 416 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CELF3Q5SZQ8 465 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 ATF7IP2Q5U623 682 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CAPRIN2Q6IMN6 1127 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 SPOPLQ6IQ16 392 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ZNF770Q6IQ21 691 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 SIGLEC15Q6ZMC9 328 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ASPGQ86U10 573 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ERO1BQ86YB8 467 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RIBC1Q8N443 379 aaPredicted RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 ZNF843Q8N446 348 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 NIPA2Q8N8Q9 360 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RNF149Q8NC42 400 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 OR5B17Q8NGF7 314 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 OR52N5Q8NH56 324 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SAP25Q8TEE9 199 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 WBP2Q969T9 261 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 IGSF21Q96ID5 467 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 NSL1Q96IY1 281 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ST6GAL2Q96JF0 529 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 ZNF560Q96MR9 790 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 MCEEQ96PE7 176 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TSSK2Q96PF2 358 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 DUX5Q96PT3 197 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RASL10BQ96S79 203 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 RHNO1Q9BSD3 238 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SPXQ9BT56 116 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 TRMT61BQ9BVS5 477 aaKnown RBP3.35□□□□□ -1.87
UBR1-211ENST00000569971 MTMR12Q9C0I1 747 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SLC39A8Q9C0K1 460 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 OR2B2Q9GZK3 357 aa3.35□□□□□ -1.87
UBR1-211ENST00000569971 SHARPINQ9H0F6 387 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms