RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RILPQ96NA2 401 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 DOHHQ9BU89 302 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 C1QTNF3Q9BXJ4 246 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ACKR4Q9NPB9 350 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■■■ 29.4
GTF3C1-211ENST00000569653 ALKBH4Q9NXW9 302 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 MAT2BQ9NZL9 334 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 PSMC3IPQ9P2W1 217 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 HEY2Q9UBP5 337 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ZNF639Q9UID6 485 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 TMCO1Q9UM00 188 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 PCDHA9Q9Y5H5 950 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 NPFFR2Q9Y5X5 522 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ANKRD33BA6NCL7 494 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 B4DXG7 233 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 DYRK3O43781 588 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 OR4F21O95013 312 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 CBX7O95931 251 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 NT5EP21589 574 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ZFP36L2P47974 494 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 HTR6P50406 440 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 VSNL1P62760 191 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 SLC29A2Q14542 456 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ERCC6LQ2NKX8 1250 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 PRICKLE4Q2TBC4 344 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 UNC50Q53HI1 259 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 CCNYL2Q5T2Q4 361 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 WLSQ5T9L3 541 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 SLC48A1Q6P1K1 146 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 MILR1Q7Z6M3 343 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 C7orf57Q8NEG2 295 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ADCY4Q8NFM4 1077 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 OR4K14Q8NGD5 310 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 DIO2Q92813 273 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 HGDQ93099 445 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 TM4SF18Q96CE8 201 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 CNRIP1Q96F85 164 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ZNF681Q96N22 645 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 GNRHR2Q96P88 292 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 MRPL57Q9BQC6 102 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ITPAQ9BY32 194 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 MRPL46Q9H2W6 279 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 EPB41L4BQ9H329 900 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 EXO5Q9H790 373 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 ANKRA2Q9H9E1 313 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 WDR41Q9HAD4 459 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 TMEM216Q9P0N5 145 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 SLC12A4Q9UP95 1085 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 SLC6A5Q9Y345 797 aa12.67□□□□□ -0.38
GTF3C1-211ENST00000569653 DLX3O60479 287 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 SMIM24O75264 130 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 ABCB1P08183 1280 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 CAPN3P20807 821 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 GDF1P27539 372 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 ABCD3P28288 659 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 HSD17B3P37058 310 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 CASP3P42574 277 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 CDK9P50750 372 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 MAPK12P53778 367 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 RAE1P78406 368 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 IFT88Q13099 833 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 EIPR1Q53HC9 387 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 RIPPLY2Q5TAB7 128 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 TTC19Q6DKK2 380 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 TIFABQ6ZNK6 161 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 DND1Q8IYX4 353 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 C1orf52Q8N6N3 182 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 TNIP2Q8NFZ5 429 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 TRPC4APQ8TEL6 797 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 UBLCP1Q8WVY7 318 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 CTHRC1Q96CG8 243 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 ZNF597Q96LX8 424 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 TMEM237Q96Q45 408 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 NODALQ96S42 347 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 TIMP4Q99727 224 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 QPCTLQ9NXS2 382 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 C15orf41Q9Y2V0 281 aa12.66□□□□□ -0.38
GTF3C1-211ENST00000569653 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 MANBAO00462 879 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 ATP1B1P05026 303 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 HPNP05981 417 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 PORP16435 677 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 PCSK2P16519 638 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 PTPN6P29350 595 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 MRPS35P82673 323 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 MAP4K2Q12851 820 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 PRSS53Q2L4Q9 553 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 TRMT12Q53H54 448 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 TAGAPQ8N103 731 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 CDYL2Q8N8U2 506 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 C17orf47Q8NEP4 570 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 SELENOMQ8WWX9 145 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 SH3GL2Q99962 352 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms