RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 CCR7P32248 378 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 OMPP47874 163 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 ANXA11P50995 505 aaKnown RBP10.3□□□□□ -0.76
CLK3-226ENST00000569406 HUNKP57058 714 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 AP1S1P61966 158 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 MBTPS1Q14703 1052 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 TIMM50Q3ZCQ8 353 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 INTS6LQ5JSJ4 861 aaKnown RBP10.3□□□□□ -0.76
CLK3-226ENST00000569406 CLEC9AQ6UXN8 241 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 ASB18Q6ZVZ8 466 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 LRRC18Q8N456 261 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 MINDY1Q8N5J2 469 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 FAM86B1Q8N7N1 296 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 PNPLA1Q8N8W4 532 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 DUSP18Q8NEJ0 188 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 UCN3Q969E3 161 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 SMARCD1Q96GM5 515 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 ACBD6Q9BR61 282 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 TMEM43Q9BTV4 400 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 PTTG3PQ9NZH4 202 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 DUSP12Q9UNI6 340 aa10.3□□□□□ -0.76
CLK3-226ENST00000569406 A0A0U1RQF3 1178 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 RFPL4AA6NLU0 287 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 RFPL4AL1F8VTS6 287 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 FXYD1O00168 92 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 IFRD1O00458 451 aaPredicted RBP10.29□□□□□ -0.76
CLK3-226ENST00000569406 UBE2CO00762 179 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 PRSS23O95084 383 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 NMBRP28336 390 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 ADRA1AP35348 466 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 IL18Q14116 193 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 GBX1Q14549 363 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 DHCR24Q15392 516 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 HYAL4Q2M3T9 481 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 GLYR1Q49A26 553 aaPredicted RBP10.29□□□□□ -0.76
CLK3-226ENST00000569406 MSANTD2Q6P1R3 559 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 LRRN1Q6UXK5 716 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 TRIM69Q86WT6 500 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 DNAJC22Q8N4W6 341 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 EFHBQ8N7U6 833 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 KLHDC9Q8NEP7 349 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 SPATA22Q8NHS9 363 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 HUS1BQ8NHY5 278 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 LINC01599Q8WXQ3 324 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 ZNF707Q96C28 371 aaPredicted RBP10.29□□□□□ -0.76
CLK3-226ENST00000569406 ZNF559Q9BR84 538 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 GRHPRQ9UBQ7 328 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 POMT2Q9UKY4 750 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 CDRT1O95170 752 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 PTHP01270 115 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 HRH2P25021 359 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 VIPR1P32241 457 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 LIMK2P53671 638 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 HABP2Q14520 560 aaPredicted RBP10.29□□□□□ -0.76
CLK3-226ENST00000569406 KRT33BQ14525 404 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 GUCA2BQ16661 112 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 ARHGAP40Q5TG30 622 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 TMEM179BQ7Z7N9 219 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 FOXRED2Q8IWF2 684 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 RIMKLAQ8IXN7 391 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 CAMKVQ8NCB2 501 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 DNASE1L2Q92874 299 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 TCF25Q9BQ70 676 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 RSRP1Q9BUV0 290 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 SPRTNQ9H040 489 aaPredicted RBP10.29□□□□□ -0.76
CLK3-226ENST00000569406 SIRT7Q9NRC8 400 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 DUSP22Q9NRW4 184 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 DZANK1Q9NVP4 752 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 TAS2R16Q9NYV7 291 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 AP2A2O94973 939 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 SLC34A2O95436 690 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 THEGLP0DJG4 465 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 ITGA3P26006 1051 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 DDTP30046 118 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 GPRC6AQ5T6X5 926 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 ETV3LQ6ZN32 361 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 ZNF561Q8N587 486 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 TMEM125Q96AQ2 219 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 CPNE1Q99829 537 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 EGFL8Q99944 293 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 OR51J1Q9H342 316 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 NUDT15Q9NV35 164 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 VAPAQ9P0L0 249 aa10.29□□□□□ -0.76
CLK3-226ENST00000569406 NFKBIL1Q9UBC1 381 aaPredicted RBP10.29□□□□□ -0.76
CLK3-226ENST00000569406 MEX3AA1L020 520 aaKnown RBP10.28□□□□□ -0.76
CLK3-226ENST00000569406 TSPAN3O60637 253 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 SERPINA3P01011 423 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 GMFBP60983 142 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 MAD2L1BPQ15013 274 aaPredicted RBP10.28□□□□□ -0.76
CLK3-226ENST00000569406 SPANXN3Q5MJ09 141 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 HEPHL1Q6MZM0 1159 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 RPL13AP3Q6NVV1 102 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 ENPP6Q6UWR7 440 aa10.28□□□□□ -0.76
CLK3-226ENST00000569406 MSANTD1Q6ZTZ1 278 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms