RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 ZNF611Q8N823 705 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 ZNF321PQ8N8H1 164 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 PRELID2Q8N945 189 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 GPATCH11Q8N954 259 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 TC2NQ8N9U0 490 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 FAM71DQ8N9W8 422 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 ABHD11Q8NFV4 315 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 OR4K1Q8NGD4 311 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 OR14A16Q8NHC5 309 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 GABPB2Q8TAK5 448 aaPredicted RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 NUBPLQ8TB37 319 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 SLC22A8Q8TCC7 542 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 PTPMT1Q8WUK0 201 aaPredicted RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 SLC44A1Q8WWI5 657 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 KRT35Q92764 455 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 UCN3Q969E3 161 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 ABTB1Q969K4 478 aaPredicted RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 INTS12Q96CB8 462 aaKnown RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 TRMT61AQ96FX7 289 aaKnown RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 SMIM10Q96HG1 83 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 ZNF597Q96LX8 424 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 JSRP1Q96MG2 331 aaPredicted RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 QRFPRQ96P65 431 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 DOHHQ9BU89 302 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 NPLQ9BXD5 320 aaPredicted RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 OSBPL8Q9BZF1 889 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 TRIM5Q9C035 493 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 OR8D2Q9GZM6 311 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 UBQLN3Q9H347 655 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 TREX1Q9NSU2 369 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 ZNHIT6Q9NWK9 470 aaKnown RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 KLHL42Q9P2K6 505 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 ZFP69BQ9UJL9 534 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 CNOT11Q9UKZ1 510 aaKnown RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 MRPS33Q9Y291 106 aaKnown RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 SLC6A5Q9Y345 797 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 PCDHA13Q9Y5I0 950 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 WIF1Q9Y5W5 379 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 CHCHD2Q9Y6H1 151 aaPredicted RBP5.33□□□□□ -1.56
CDH13-212ENST00000569144 ATP23Q9Y6H3 246 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 SCN3AQ9NY46 2000 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 KIAA1549Q9HCM3 1950 aa5.33□□□□□ -1.56
CDH13-212ENST00000569144 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 LRRC14BA6NHZ5 514 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 C4orf51C9J302 202 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 AKR1B15C9JRZ8 316 aaPredicted RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 OVOL3O00110 214 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 HS3ST1O14792 307 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 AKR1B10O60218 316 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 TNFSF13O75888 250 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 DNAJC8O75937 253 aaPredicted RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 ACSL3O95573 720 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 ACTL6AO96019 429 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 TPM1P09493 284 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 CPN1P15169 458 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 NPPBP16860 134 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 CHMP24386 653 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 UGT2B10P36537 528 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 ACVR1BP36896 505 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 HNF4AP41235 474 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 GRIA1P42261 906 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 RPL21P46778 160 aaKnown RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 KCNC1P48547 511 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 HNRNPFP52597 415 aaKnown RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 HADHBP55084 474 aaKnown RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 RAB38P57729 211 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 BEX5Q5H9J7 111 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 PCID2Q5JVF3 399 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 UBAP2Q5T6F2 1119 aaKnown RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 LIPNQ5VXI9 398 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 CD276Q5ZPR3 534 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 MRNIPQ6NTE8 343 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 AGTRAPQ6RW13 159 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 CYHR1Q6ZMK1 362 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 SH2D5Q6ZV89 423 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 UBE2R2Q712K3 238 aaPredicted RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 ZNF550Q7Z398 422 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 CLNKQ7Z7G1 428 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 SDCCAG8Q86SQ7 713 aaPredicted RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 MEX3DQ86XN8 651 aaKnown RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 GCNT2Q8N0V5 402 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 OTUD6BQ8N6M0 293 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 TRPV3Q8NET8 790 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 OR10G3Q8NGC4 313 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 SLC2A12Q8TD20 617 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 CAVIN3Q969G5 261 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 ANKRD9Q96BM1 317 aaPredicted RBP5.32□□□□□ -1.56
CDH13-212ENST00000569144 ART5Q96L15 291 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 FAM111AQ96PZ2 611 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 HAUS8Q9BT25 410 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 SHARPINQ9H0F6 387 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 SLCO5A1Q9H2Y9 848 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 GOLPH3Q9H4A6 298 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 KLHL31Q9H511 634 aa5.32□□□□□ -1.56
CDH13-212ENST00000569144 NHEJ1Q9H9Q4 299 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms