RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SOX30O94993 753 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 PCNAP12004 261 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 ABCD3P28288 659 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 LOXP28300 417 aaPredicted RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 SSTR4P31391 388 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 UGT2B10P36537 528 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 RAP1GDS1P52306 607 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 RPS13P62277 151 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 ILF2Q12905 390 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 CAPRIN1Q14444 709 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 STEAP4Q687X5 459 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 ZNF615Q8N8J6 731 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 PDPRQ8NCN5 879 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 OR7G3Q8NG95 312 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 OR14L1PQ8NHC6 308 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 TMEM171Q8WVE6 324 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 STARD4Q96DR4 205 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 FAM111AQ96PZ2 611 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 SLC39A3Q9BRY0 314 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 OR51B5Q9H339 312 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 ACTR8Q9H981 624 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 LYARQ9NX58 379 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 PTBP2Q9UKA9 531 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 RNF112Q9ULX5 631 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 EXO1Q9UQ84 846 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 LRRC14BA6NHZ5 514 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 WASHC1A8K0Z3 465 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 C16orf97H3BN30 126 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 PLOD2O00469 737 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 DNALI1O14645 258 aaPredicted RBP11.3□□□□□ -0.6
SNX29-207ENST00000568949 CCNT2O60583 730 aaKnown RBP11.3□□□□□ -0.6
SNX29-207ENST00000568949 ICOSLGO75144 302 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 PPM1BO75688 479 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 SMNDC1O75940 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX29-207ENST00000568949 WISP3O95389 354 aaPredicted RBP11.3□□□□□ -0.6
SNX29-207ENST00000568949 NR2F6P10588 404 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 ELK3P41970 407 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 FNTAP49354 379 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 LHX2P50458 406 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 GFRA1P56159 465 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 MGAT5Q09328 741 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 TNK1Q13470 666 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 OR2A2Q6IF42 318 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 MRM1Q6IN84 353 aaKnown RBP11.3□□□□□ -0.6
SNX29-207ENST00000568949 AAGABQ6PD74 315 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 PLXDC2Q6UX71 529 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 LRRC70Q7Z2Q7 622 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 NUP54Q7Z3B4 507 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 IFNEQ86WN2 208 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 PRR22Q8IZ63 422 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 HGDQ93099 445 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 CAVIN3Q969G5 261 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 LRRC39Q96DD0 335 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 DTNBP1Q96EV8 351 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 CFAP36Q96G28 342 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 NAP1L3Q99457 506 aaPredicted RBP11.3□□□□□ -0.6
SNX29-207ENST00000568949 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 CD244Q9BZW8 370 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 OR10A5Q9H207 317 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 WDR41Q9HAD4 459 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 SERHLQ9NQF3 203 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 ASB4Q9Y574 426 aa11.3□□□□□ -0.6
SNX29-207ENST00000568949 A0A0A6YYD5 115 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 A0A1W2PR48 441 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 GLOD5A6NK44 160 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PLPP1O14494 284 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 TLX2O43763 284 aaPredicted RBP11.29□□□□□ -0.6
SNX29-207ENST00000568949 TGM6O95932 706 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 POU2F1P14859 743 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 ZNF708P17019 499 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 CCKARP32238 428 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PTGDSP41222 190 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PIK3CBP42338 1070 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 SLC12A2P55011 1212 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 ATP5J2P56134 94 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 CLDN18P56856 261 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 ATP6V0D1P61421 351 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 BTLAQ7Z6A9 289 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 GALNT12Q8IXK2 581 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PDIK1LQ8N165 341 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 WDSUB1Q8N9V3 476 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 OR7G1Q8NGA0 311 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 HUS1BQ8NHY5 278 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PGM2Q96G03 612 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 MS4A14Q96JA4 679 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PBKQ96KB5 322 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 NODALQ96S42 347 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 PIGQQ9BRB3 760 aa11.29□□□□□ -0.6
SNX29-207ENST00000568949 ZNF717Q9BY31 904 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms