RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	CKMT1A	P12532	417 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	MMP11	P24347	488 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	GTF2E2	P29084	291 aa	Known RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	CMPK1	P30085	196 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	DRD3	P35462	400 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	PRKAG1	P54619	331 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	TPTE	P56180	551 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	STXBP1	P61764	594 aa	Known RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	CDK5	Q00535	292 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	SGCG	Q13326	291 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	CAMK1	Q14012	370 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	IRF4	Q15306	451 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	DUSP6	Q16828	381 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	GPAT3	Q53EU6	434 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	USP30	Q70CQ3	517 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	CLIP4	Q8N3C7	705 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	SCAI	Q8N9R8	606 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	MS4A6E	Q96DS6	147 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	OTUB1	Q96FW1	271 aa	Predicted RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	LRR1	Q96L50	414 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	KCNS3	Q9BQ31	491 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	SARG	Q9BW04	601 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	MTIF3	Q9H2K0	278 aa	Known RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	SFXN1	Q9H9B4	322 aa		11.95	□□□□□ -0.5
PKM-222	ENST00000568883	MOV10	Q9HCE1	1003 aa	Known RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	MRPS18A	Q9NVS2	196 aa	Known RBP	11.95	□□□□□ -0.5
PKM-222	ENST00000568883	PTPRS	Q13332	1948 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	STK25	O00506	426 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	MID1	O15344	667 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	RGS5	O15539	181 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	PRODH	O43272	600 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TPST2	O60704	377 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	KAT7	O95251	611 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	AGR2	O95994	175 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ALPP	P05187	535 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TSPAN19	P0C672	248 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	OPRD1	P41143	372 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	BCL6	P41182	706 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	SOX3	P41225	446 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	DGKE	P52429	567 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TAS2R41	P59536	307 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	RPS21	P63220	83 aa	Known RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	RUNX3	Q13761	415 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TRAM2	Q15035	370 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	SNAPC1	Q16533	368 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	SYT14P1	Q58G82	188 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TMEM240	Q5SV17	173 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	PRPF38B	Q5VTL8	546 aa	Known RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	MRM1	Q6IN84	353 aa	Known RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	SLC27A4	Q6P1M0	643 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ABHD17C	Q6PCB6	329 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TMC5	Q6UXY8	1006 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	TMPRSS11A	Q6ZMR5	421 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ZNF793	Q6ZN11	406 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	PRR23C	Q6ZRP0	262 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	RRM2B	Q7LG56	351 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ZER1	Q7Z7L7	766 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	CLDN22	Q8N7P3	220 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ACOT4	Q8N9L9	421 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	MORN4	Q8NDC4	146 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	FGF13	Q92913	245 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ZNF582	Q96NG8	517 aa	Predicted RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	PRDM8	Q9NQV8	689 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	SNX7	Q9UNH6	387 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.94	□□□□□ -0.5
PKM-222	ENST00000568883	GRIP1	Q9Y3R0	1128 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ASB4	Q9Y574	426 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	OR1A2	Q9Y585	309 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	ZNF780B	Q9Y6R6	833 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883	KIAA1549L	Q6ZVL6	1849 aa		11.94	□□□□□ -0.5
PKM-222	ENST00000568883		A0A0G2JN53	185 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	TMEM129	A0AVI4	362 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	PRAMEF27	A3QJZ7	478 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	SLC35F4	A4IF30	521 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	DYRK3	O43781	588 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	PRKY	O43930	277 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	TP53	P04637	393 aa	Predicted RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	APOD	P05090	189 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	HMGN2	P05204	90 aa	Known RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	CHRM4	P08173	479 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	ADRA2A	P08913	450 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	ACP2	P11117	423 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	CPE	P16870	476 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	ATP5A1	P25705	553 aa	Known RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	TNFSF8	P32971	234 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	RPS19	P39019	145 aa	Known RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	CRYBB2	P43320	205 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	WNT4	P56705	351 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	ST3GAL3	Q11203	375 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	LASP1	Q14847	261 aa	Known RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	MLF2	Q15773	248 aa	Predicted RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	ZNF311	Q5JNZ3	666 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	DESI1	Q6ICB0	168 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	SLC48A1	Q6P1K1	146 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.93	□□□□□ -0.5
PKM-222	ENST00000568883	LAPTM4B	Q86VI4	370 aa		11.93	□□□□□ -0.5
PKM-222	ENST00000568883	PHC2	Q8IXK0	858 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms