RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FCRLBQ6BAA4 426 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 RPS19BP1Q86WX3 136 aaKnown RBP15.54■□□□□ 0.08
COMMD4-224ENST00000568877 ARMC10Q8N2F6 343 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 OR4A15Q8NGL6 344 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 C16orf52Q8NHV5 167 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 NUBPLQ8TB37 319 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 THAP3Q8WTV1 239 aaPredicted RBP15.54■□□□□ 0.08
COMMD4-224ENST00000568877 VPS33AQ96AX1 596 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 ZNF354BQ96LW1 612 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 CCDC115Q96NT0 180 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 NPAS2Q99743 824 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 CDCP1Q9H5V8 836 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 CXorf36Q9H7Y0 433 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 C3orf14Q9HBI5 128 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 TAS2R9Q9NYW1 312 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 NTMQ9P121 344 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 PRODH2Q9UF12 536 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 ERVK-11Q9UQG0 969 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 CFL2Q9Y281 166 aa15.54■□□□□ 0.08
COMMD4-224ENST00000568877 DSPP15924 2871 aaKnown RBP15.54■□□□□ 0.08
COMMD4-224ENST00000568877 MGAQ8IWI9 3026 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 C2orf92A0A1B0GVN3 265 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 CCDC154A6NI56 674 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 NR5A2O00482 541 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 EMC8O43402 210 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 CCDC22O60826 627 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 COQ9O75208 318 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 CPSF4O95639 269 aaKnown RBP15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ALPPP05187 535 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ABCB1P08183 1280 aaPredicted RBP15.53■□□□□ 0.08
COMMD4-224ENST00000568877 FAM87AP0C7U9 286 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 CD1EP15812 388 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 KCNAB2Q13303 367 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 MEP1AQ16819 746 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ACER2Q5QJU3 275 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ABHD17BQ5VST6 288 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 TCTN3Q6NUS6 607 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ISLR2Q6UXK2 745 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 TMEM64Q6YI46 380 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 MSANTD1Q6ZTZ1 278 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 LGI4Q8N135 537 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 SPDL1Q96EA4 605 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ABHD17AQ96GS6 310 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 LMF1Q96S06 567 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 SMAD5Q99717 465 aaKnown RBP15.53■□□□□ 0.08
COMMD4-224ENST00000568877 NMUR2Q9GZQ4 415 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 WWTR1Q9GZV5 400 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ADNPQ9H2P0 1102 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 RMND5AQ9H871 391 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 LIN28AQ9H9Z2 209 aaKnown RBP15.53■□□□□ 0.08
COMMD4-224ENST00000568877 SLC52A3Q9NQ40 469 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 STMN3Q9NZ72 180 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 MYOTQ9UBF9 498 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 TUBD1Q9UJT1 453 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 ARL2BPQ9Y2Y0 163 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 HEMK1Q9Y5R4 338 aaPredicted RBP15.53■□□□□ 0.08
COMMD4-224ENST00000568877 SNX8Q9Y5X2 465 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 USP24Q9UPU5 2620 aa15.53■□□□□ 0.08
COMMD4-224ENST00000568877 CROCCQ5TZA2 2017 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 DYTNA2CJ06 578 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 ERVH48-1M5A8F1 160 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 FCHO1O14526 889 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 MAN1A2O60476 641 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 PSMG1O95456 288 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 ADSLP30566 484 aaPredicted RBP15.52■□□□□ 0.08
COMMD4-224ENST00000568877 CCT3P49368 545 aaKnown RBP15.52■□□□□ 0.08
COMMD4-224ENST00000568877 PRKAG1P54619 331 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 MLF1P58340 268 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 PRR5P85299 388 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 KLF10Q13118 480 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 MFAP5Q13361 173 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 MAPKAPK3Q16644 382 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 VPS26BQ4G0F5 336 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 HLA-DQA1Q5Y7H0 255 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 C16orf47Q6ZP98 133 aaPredicted RBP15.52■□□□□ 0.08
COMMD4-224ENST00000568877 LINC00696Q6ZRV3 163 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 NUP43Q8NFH3 380 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 GOT1L1Q8NHS2 421 aaPredicted RBP15.52■□□□□ 0.08
COMMD4-224ENST00000568877 FAM120BQ96EK7 910 aaKnown RBP15.52■□□□□ 0.08
COMMD4-224ENST00000568877 PANX1Q96RD7 426 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 GAL3ST4Q96RP7 486 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 TRIM4Q9C037 500 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 ZCCHC3Q9NUD5 404 aaKnown RBP15.52■□□□□ 0.08
COMMD4-224ENST00000568877 DTX4Q9Y2E6 619 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 PCDHGB7Q9Y5F8 929 aa15.52■□□□□ 0.08
COMMD4-224ENST00000568877 WWP2O00308 870 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 RFXANKO14593 260 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 NME6O75414 186 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-224ENST00000568877 SNRPB2P08579 225 aaKnown RBP15.51■□□□□ 0.07
COMMD4-224ENST00000568877 CAPN3P20807 821 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 SOAT1P35610 550 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 TLR1Q15399 786 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 SPDYE7PQ495Y7 208 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 GKAP1Q5VSY0 366 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-224ENST00000568877 IGFL2Q6UWQ7 119 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 GK5Q6ZS86 529 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 SZRD1Q7Z422 152 aa15.51■□□□□ 0.07
COMMD4-224ENST00000568877 MTERF4Q7Z6M4 381 aaKnown RBP15.51■□□□□ 0.07
COMMD4-224ENST00000568877 MTDHQ86UE4 582 aaKnown RBP15.51■□□□□ 0.07
COMMD4-224ENST00000568877 ZNF441Q8N8Z8 693 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms