RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 LRRC3CA6NJW4 275 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 G3V2L1 256 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 COPEO14579 308 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 WDR1O75083 606 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 CDH16O75309 829 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 SNX4O95219 450 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 LRATO95237 230 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 PROCP04070 461 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 SNRPB2P08579 225 aaKnown RBP17.24■□□□□ 0.35
IFT140-208ENST00000566818 CELA3AP09093 270 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 PRF1P14222 555 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 CHN1P15882 459 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 ACVR2AP27037 513 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 GDF1P27539 372 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 TIA1P31483 386 aaKnown RBP eCLIP17.24■□□□□ 0.35
IFT140-208ENST00000566818 FBXW4P57775 412 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 HMGCS1Q01581 520 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 CDSNQ15517 529 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 IMPG1Q17R60 797 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 EMC4Q5J8M3 183 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 FAM219BQ5XKK7 198 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 ZNF585AQ6P3V2 769 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 TMEM64Q6YI46 380 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 SPPL2AQ8TCT8 520 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 ITPAQ9BY32 194 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 DLGAP4Q9Y2H0 992 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 TIMM22Q9Y584 194 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 ZNF407Q9C0G0 2248 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 EML6Q6ZMW3 1958 aa17.24■□□□□ 0.35
IFT140-208ENST00000566818 CACNA1CQ13936 2221 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 SERTM1A2A2V5 107 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ACOX3O15254 700 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 PLIN3O60664 434 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 BCAS2O75934 225 aaPredicted RBP17.23■□□□□ 0.35
IFT140-208ENST00000566818 NAGAP17050 411 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 S1PR1P21453 382 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ABCD3P28288 659 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 CRHR1P34998 444 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 MASP1P48740 699 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 DNAJB13P59910 316 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 DCAF7P61962 342 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 PLCXD2Q0VAA5 305 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 EXOSC7Q15024 291 aaKnown RBP17.23■□□□□ 0.35
IFT140-208ENST00000566818 SPDYAQ5MJ70 313 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 GALNT18Q6P9A2 607 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 FAM111BQ6SJ93 734 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 B3GNT6Q6ZMB0 384 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 FRMD7Q6ZUT3 714 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 PACS2Q86VP3 889 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 PRR22Q8IZ63 422 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ADCY4Q8NFM4 1077 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 OR52R1Q8NGF1 315 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ZNF675Q8TD23 568 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ERP27Q96DN0 273 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 HSPBAP1Q96EW2 488 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 CNRIP1Q96F85 164 aaPredicted RBP17.23■□□□□ 0.35
IFT140-208ENST00000566818 LCORQ96JN0 433 aaPredicted RBP17.23■□□□□ 0.35
IFT140-208ENST00000566818 RILPQ96NA2 401 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 KCNA7Q96RP8 456 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 NXF5Q9H1B4 397 aaKnown RBP17.23■□□□□ 0.35
IFT140-208ENST00000566818 PROK2Q9HC23 129 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ACKR4Q9NPB9 350 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 ZNF639Q9UID6 485 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 RNF6Q9Y252 685 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 HRH3Q9Y5N1 445 aa17.23■□□□□ 0.35
IFT140-208ENST00000566818 C19orf84I3L1E1 186 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 TRIM3O75382 744 aaPredicted RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 PPM1BO75688 479 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 CBX7O95931 251 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 HOXD4P09016 255 aaPredicted RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 RFPL3SP0C7P2 107 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 PCSK2P16519 638 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 NAGLUP54802 743 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 NUP107P57740 925 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 RAE1P78406 368 aaKnown RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 BTKQ06187 659 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 ZNF763Q0D2J5 394 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 MGAT2Q10469 447 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 PMPCAQ10713 525 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 LTB4RQ15722 352 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 NNATQ16517 81 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 ERCC6LQ2NKX8 1250 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 SRRM1Q8IYB3 904 aaKnown RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 EPS8L3Q8TE67 593 aaKnown RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 C16orf78Q8WTQ4 265 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 EXOSC8Q96B26 276 aaKnown RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 CTHRC1Q96CG8 243 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 APIPQ96GX9 242 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 ZNF681Q96N22 645 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 EBPLQ9BY08 206 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 ANGPTL4Q9BY76 406 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 IQCGQ9H095 443 aaKnown RBP17.22■□□□□ 0.35
IFT140-208ENST00000566818 METTL7AQ9H8H3 244 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 SIRT5Q9NXA8 310 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 EHD3Q9NZN3 535 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 SENP1Q9P0U3 644 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 HEY2Q9UBP5 337 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 DTX4Q9Y2E6 619 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 PLLPQ9Y342 182 aa17.22■□□□□ 0.35
IFT140-208ENST00000566818 MYO9AB2RTY4 2548 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms