RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 MAPKAPK3Q16644 382 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 SLC25A25Q6KCM7 469 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 LARP4Q71RC2 724 aaKnown RBP eCLIP12.66□□□□□ -0.38
SPG7-215ENST00000566682 R3HCC1LQ7Z5L2 792 aaKnown RBP12.66□□□□□ -0.38
SPG7-215ENST00000566682 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 CYP4Z2PQ8N1L4 340 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 TMEM178AQ8NBL3 297 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 OR52R1Q8NGF1 315 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 PIWIL2Q8TC59 973 aaKnown RBP12.66□□□□□ -0.38
SPG7-215ENST00000566682 SLC22A8Q8TCC7 542 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 LRRC8CQ8TDW0 803 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 ADIPOR1Q96A54 375 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 TP53INP1Q96A56 240 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 TMEM125Q96AQ2 219 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 CIDECQ96AQ7 238 aaPredicted RBP12.66□□□□□ -0.38
SPG7-215ENST00000566682 MIB2Q96AX9 1013 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 MTERF3Q96E29 417 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 SCMH1Q96GD3 660 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 C5orf34Q96MH7 638 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 HPF1Q9NWY4 346 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 ASIC5Q9NY37 505 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 NOP53Q9NZM5 478 aaKnown RBP12.66□□□□□ -0.38
SPG7-215ENST00000566682 ERVK-11Q9UQG0 969 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 CFL2Q9Y281 166 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 DTX4Q9Y2E6 619 aa12.66□□□□□ -0.38
SPG7-215ENST00000566682 ZNF462Q96JM2 2506 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 J3QKU1 62 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 SDHDO14521 159 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 SCAMP2O15127 329 aaKnown RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 PDPK1O15530 556 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 VPS4BO75351 444 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 BCAS2O75934 225 aaPredicted RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 RASAL1O95294 804 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 NADKO95544 446 aaPredicted RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 LBPP18428 481 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 GPX3P22352 226 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 RPL3P39023 403 aaKnown RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 FRKP42685 505 aaPredicted RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 EMDP50402 254 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 NR0B1P51843 470 aaKnown RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 DIO3P55073 304 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 OPN5Q6U736 354 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 GALNTL5Q7Z4T8 443 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 GPALPP1Q8IXQ4 340 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 LRRC34Q8IZ02 419 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 ZNF441Q8N8Z8 693 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 OR7G2Q8NG99 324 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 OR7A2PQ8NGA2 310 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 NUDT8Q8WV74 236 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 C7orf26Q96N11 449 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 AMDHD1Q96NU7 426 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 TAAR6Q96RI8 345 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 WDR55Q9H6Y2 383 aaPredicted RBP12.65□□□□□ -0.38
SPG7-215ENST00000566682 SLCO1B3Q9NPD5 702 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 ATP6V1HQ9UI12 483 aa12.65□□□□□ -0.38
SPG7-215ENST00000566682 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
SPG7-215ENST00000566682 GOLGA8QA0A0J9YX86 632 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 GOLGA8OA6NCC3 632 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 GOLGA8NF8WBI6 632 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 PLOD2O00469 737 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 ZNF195O14628 629 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 NME2P1O60361 137 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 PLOD3O60568 738 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 NME6O75414 186 aaPredicted RBP12.64□□□□□ -0.39
SPG7-215ENST00000566682 PRPS1L1P21108 318 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 NME2P22392 152 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 EPHA3P29320 983 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 HPCAL1P37235 193 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 MANFP55145 182 aaKnown RBP12.64□□□□□ -0.39
SPG7-215ENST00000566682 CLDN8P56748 225 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 INAQ16352 499 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 FHL5Q5TD97 284 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 FAM180AQ6UWF9 173 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 TMEM107Q6UX40 140 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 ZNF551Q7Z340 670 aaPredicted RBP12.64□□□□□ -0.39
SPG7-215ENST00000566682 RIMKLAQ8IXN7 391 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 TAGAPQ8N103 731 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 PSD4Q8NDX1 1056 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 C17orf47Q8NEP4 570 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 CKAP2Q8WWK9 683 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
SPG7-215ENST00000566682 NXF5Q9H1B4 397 aaKnown RBP12.64□□□□□ -0.39
SPG7-215ENST00000566682 TIMMDC1Q9NPL8 285 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 AGPAT4Q9NRZ5 378 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
SPG7-215ENST00000566682 EXPH5Q8NEV8 1989 aa12.63□□□□□ -0.39
SPG7-215ENST00000566682 NUP214P35658 2090 aaPredicted RBP12.63□□□□□ -0.39
SPG7-215ENST00000566682 A0A087WV62 115 aa12.63□□□□□ -0.39
SPG7-215ENST00000566682 SLITRK5O94991 958 aa12.63□□□□□ -0.39
SPG7-215ENST00000566682 LAMP1P11279 417 aa12.63□□□□□ -0.39
SPG7-215ENST00000566682 DDX5P17844 614 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms