RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 MLC1Q15049 377 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 BORAQ6PGQ7 559 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 DNAJC14Q6Y2X3 702 aaPredicted RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 MSANTD1Q6ZTZ1 278 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 PIGWQ7Z7B1 504 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 APLFQ8IW19 511 aaPredicted RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 CPSF7Q8N684 471 aaKnown RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 AMER2Q8N7J2 671 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 APCDD1LQ8NCL9 501 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 OR7G2Q8NG99 324 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 OR4A15Q8NGL6 344 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 OR1N1Q8NGS0 311 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 BRIX1Q8TDN6 353 aaKnown RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 ELP5Q8TE02 316 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 APOBEC4Q8WW27 367 aaKnown RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 OR5P2Q8WZ92 322 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 VPS33AQ96AX1 596 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 CTHRC1Q96CG8 243 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 ERP27Q96DN0 273 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 SPDL1Q96EA4 605 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 THOC3Q96J01 351 aaKnown RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 OR52E6Q96RD3 313 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 NUDT9Q9BW91 350 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 SEMA4CQ9C0C4 833 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 DDX18Q9NVP1 670 aaKnown RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 TMEM45AQ9NWC5 275 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 GPR83Q9NYM4 423 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 ARMCX1Q9P291 453 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 BCAP29Q9UHQ4 241 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 ZNF223Q9UK11 482 aaPredicted RBP10.67□□□□□ -0.7
KARS-207ENST00000566560 SNX8Q9Y5X2 465 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 ZFHX4Q86UP3 3567 aa10.67□□□□□ -0.7
KARS-207ENST00000566560 PRSS51A0A1B0GVH4 220 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 NDUFAB1O14561 156 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 SLC22A2O15244 555 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 PLOD3O60568 738 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 CBX7O95931 251 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 CLPSP04118 112 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 ITGB2P05107 769 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 IFI6P09912 130 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 CAPN3P20807 821 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 GPR143P51810 404 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 HBA1P69905 142 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 PHC1P78364 1004 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 LRRC74AQ0VAA2 488 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 MGAT2Q10469 447 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 ZNF155Q12901 538 aaPredicted RBP10.66□□□□□ -0.7
KARS-207ENST00000566560 RAPSNQ13702 412 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 MAPRE2Q15555 327 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 COL28A1Q2UY09 1125 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 SPDYE7PQ495Y7 208 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 TRMT12Q53H54 448 aaKnown RBP10.66□□□□□ -0.7
KARS-207ENST00000566560 JMJD6Q6NYC1 403 aaPredicted RBP10.66□□□□□ -0.7
KARS-207ENST00000566560 C19orf48Q6RUI8 117 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 HSDL2Q6YN16 418 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 GPR155Q7Z3F1 870 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 FUNDC1Q8IVP5 155 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 C9orf40Q8IXQ3 194 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 GALNT16Q8N428 558 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 SLC5A8Q8N695 610 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 SIRT6Q8N6T7 355 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 CCDC197Q8NCU1 140 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 OR7G1Q8NGA0 311 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 OR52R1Q8NGF1 315 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 EXTL1Q92935 676 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 ELP4Q96EB1 424 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 MAGED4Q96JG8 741 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 CCDC115Q96NT0 180 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 MS4A4EQ96PG1 132 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 GAL3ST4Q96RP7 486 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 DEFB126Q9BYW3 111 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 LHPPQ9H008 270 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 OR10A5Q9H207 317 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 PRORYQ9H606 182 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 CXorf36Q9H7Y0 433 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 RMND5AQ9H871 391 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 ANKRA2Q9H9E1 313 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 SIRT3Q9NTG7 399 aaPredicted RBP10.66□□□□□ -0.7
KARS-207ENST00000566560 TAS2R9Q9NYW1 312 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 PTGFRNQ9P2B2 879 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 ZNF639Q9UID6 485 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 PCDHGB4Q9UN71 923 aa10.66□□□□□ -0.7
KARS-207ENST00000566560 A0A087WV62 115 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 RNF103-CHMP3A0A140T963 221 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 DYTNA2CJ06 578 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 A6NL46 340 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 OR6C76A6NM76 312 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 UPK1AO00322 258 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 PLOD2O00469 737 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 ANGPT2O15123 496 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 SCN2BO60939 215 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 BCAS2O75934 225 aaPredicted RBP10.65□□□□□ -0.7
KARS-207ENST00000566560 DCTN3O75935 186 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 CPSF4O95639 269 aaKnown RBP10.65□□□□□ -0.7
KARS-207ENST00000566560 CD1EP15812 388 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 SOX18P35713 384 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 CCL11P51671 97 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 POLE2P56282 527 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 SLC37A1P57057 533 aa10.65□□□□□ -0.7
KARS-207ENST00000566560 PRR5P85299 388 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms