RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 NNATQ16517 81 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 LGSNQ5TDP6 509 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 FNDC7Q5VTL7 733 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 FAM180BQ6P0A1 224 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ULK2Q8IYT8 1036 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 CDYL2Q8N8U2 506 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 SIMC1Q8NDZ2 872 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 C17orf47Q8NEP4 570 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 KLHL29Q96CT2 875 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 MTBPQ96DY7 904 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 RILPQ96NA2 401 aa15.97■□□□□ 0.15
MAP1LC3B-207ENST00000565788 TACC2O95359 2948 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 RIPK2O43353 540 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 DLX3O60479 287 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ATP1B1P05026 303 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 HOXD4P09016 255 aaPredicted RBP15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 CHN1P15882 459 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 CAPN3P20807 821 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 CASP3P42574 277 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ALDH9A1P49189 494 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 MAP4K2Q12851 820 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 RASA2Q15283 850 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 LTB4RQ15722 352 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 TRMT10CQ7L0Y3 403 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ADCY4Q8NFM4 1077 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 CNRIP1Q96F85 164 aaPredicted RBP15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ZNF382Q96SR6 550 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 SECISBP2Q96T21 854 aaKnown RBP15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ITPAQ9BY32 194 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ANGPTL4Q9BY76 406 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 UBQLN3Q9H347 655 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 NMRK1Q9NWW6 199 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 VPS29Q9UBQ0 182 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 BCAP29Q9UHQ4 241 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 ZNF639Q9UID6 485 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 PCDHGB3Q9Y5G1 929 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 CCDC168Q8NDH2 2452 aa15.96■□□□□ 0.15
MAP1LC3B-207ENST00000565788 TEP1Q99973 2627 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 C15orf38-AP3S2A0A0A6YYH1 394 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 GOLGA8RI6L899 631 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 TRAPPC6AO75865 159 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 SNX4O95219 450 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CBX7O95931 251 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 ABCB1P08183 1280 aaPredicted RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HSD3B1P14060 373 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 KRT15P19012 456 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CSNK2A2P19784 350 aaPredicted RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HSD3B2P26439 372 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 MASP1P48740 699 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HTR6P50406 440 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 TRA2BP62995 288 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 RPP38P78345 283 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CRYZQ08257 329 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CSTF3Q12996 717 aaKnown RBP15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 RIPPLY2Q5TAB7 128 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 DESI1Q6ICB0 168 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 GPRIN3Q6ZVF9 776 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 SEM1Q6ZVN7 128 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CDH24Q86UP0 819 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CTHRC1Q96CG8 243 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 NTNG2Q96CW9 530 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 ZNF681Q96N22 645 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 GNRHR2Q96P88 292 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 FAIM2Q9BWQ8 316 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HEY2Q9UBP5 337 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 PSME2Q9UL46 239 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CFL2Q9Y281 166 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 C15orf41Q9Y2V0 281 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 PLLPQ9Y342 182 aa15.95■□□□□ 0.14
MAP1LC3B-207ENST00000565788 KDM4EB2RXH2 506 aaPredicted RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 GNB5O14775 395 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 PPM1BO75688 479 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 KRT6AP02538 564 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 KRT6BP04259 564 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HPNP05981 417 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 FAM153BP0C7A2 387 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 PCSK2P16519 638 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 IMPDH1P20839 514 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 ATP5F1P24539 256 aaPredicted RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HMOX2P30519 316 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 KRT6CP48668 564 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 CDK9P50750 372 aaKnown RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 DLX5P56178 289 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 MRPS35P82673 323 aaKnown RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 SLC25A35Q3KQZ1 300 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 FAM153CQ494X1 144 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 TRMT12Q53H54 448 aaKnown RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 WDR53Q7Z5U6 358 aaPredicted RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 PACS2Q86VP3 889 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 IFT20Q8IY31 132 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 OR52R1Q8NGF1 315 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 HGDQ93099 445 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 OMA1Q96E52 524 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 TMEM41AQ96HV5 264 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 LCORQ96JN0 433 aaPredicted RBP15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 NODALQ96S42 347 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 ZNF559Q9BR84 538 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 ACPTQ9BZG2 426 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 MCM8Q9UJA3 840 aa15.94■□□□□ 0.14
MAP1LC3B-207ENST00000565788 SLC6A5Q9Y345 797 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms